Gene CHU_2825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2825 
SymbolrnhB 
ID4184189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3222646 
End bp3223254 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content43% 
IMG OID638072816 
ProductRNase HII 
Protein accessionYP_679415 
Protein GI110639206 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATATGT CGCTTTTATC ATTTCATTCT GAAGGAAAAA TTGAAGCCGG TCTGGACGAG 
GCGGGCAGAG GTTGCATGGC TGGTCCGGTC GTTGCTGCAG CTGTTATTCT TCCACCCAAT
TACAAGCATT CATTGTTGAA TGATTCTAAA AAGTTAACCA TAAAACAGCG CGAATTGCTG
CGTCAGGATA TCATCCGCGA TGCACTTGAT TATCACGTAG CGGAAGTTTC CCATACCGTT
ATTGATCAGA TCAATATTTT AAACGCTACC ATGAAAGCCA TGCACAAGGC AGTAAAAGGC
TTAAAGAAAC AGCAACCAAA TTTACTTCTT ATTGACGGCA ACCGATTCAA ACAATACACC
GGCATTGAAC ATGTATGTAT TGTGCAGGGA GATGGACTTT ATTTATCTAT AGCTGCAGCT
TCCGTATTAG CTAAAACGCA CCGTGATTCC CTTATGGAAA GACTTGCCAA AGAGCATCCT
GAATACGGTT GGGATGTAAA TGCCGGATAC GCTACAGAAA AGCACAGGCT TGCCATGGAG
ACACATGGGC TTACTCCTTA CCACAGAACG TCCTTCCATT TCAAACCAAA ACAATTAGAT
CTTTTTTAA
 
Protein sequence
MDMSLLSFHS EGKIEAGLDE AGRGCMAGPV VAAAVILPPN YKHSLLNDSK KLTIKQRELL 
RQDIIRDALD YHVAEVSHTV IDQINILNAT MKAMHKAVKG LKKQQPNLLL IDGNRFKQYT
GIEHVCIVQG DGLYLSIAAA SVLAKTHRDS LMERLAKEHP EYGWDVNAGY ATEKHRLAME
THGLTPYHRT SFHFKPKQLD LF