Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2825 |
Symbol | rnhB |
ID | 4184189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3222646 |
End bp | 3223254 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638072816 |
Product | RNase HII |
Protein accession | YP_679415 |
Protein GI | 110639206 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATATGT CGCTTTTATC ATTTCATTCT GAAGGAAAAA TTGAAGCCGG TCTGGACGAG GCGGGCAGAG GTTGCATGGC TGGTCCGGTC GTTGCTGCAG CTGTTATTCT TCCACCCAAT TACAAGCATT CATTGTTGAA TGATTCTAAA AAGTTAACCA TAAAACAGCG CGAATTGCTG CGTCAGGATA TCATCCGCGA TGCACTTGAT TATCACGTAG CGGAAGTTTC CCATACCGTT ATTGATCAGA TCAATATTTT AAACGCTACC ATGAAAGCCA TGCACAAGGC AGTAAAAGGC TTAAAGAAAC AGCAACCAAA TTTACTTCTT ATTGACGGCA ACCGATTCAA ACAATACACC GGCATTGAAC ATGTATGTAT TGTGCAGGGA GATGGACTTT ATTTATCTAT AGCTGCAGCT TCCGTATTAG CTAAAACGCA CCGTGATTCC CTTATGGAAA GACTTGCCAA AGAGCATCCT GAATACGGTT GGGATGTAAA TGCCGGATAC GCTACAGAAA AGCACAGGCT TGCCATGGAG ACACATGGGC TTACTCCTTA CCACAGAACG TCCTTCCATT TCAAACCAAA ACAATTAGAT CTTTTTTAA
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Protein sequence | MDMSLLSFHS EGKIEAGLDE AGRGCMAGPV VAAAVILPPN YKHSLLNDSK KLTIKQRELL RQDIIRDALD YHVAEVSHTV IDQINILNAT MKAMHKAVKG LKKQQPNLLL IDGNRFKQYT GIEHVCIVQG DGLYLSIAAA SVLAKTHRDS LMERLAKEHP EYGWDVNAGY ATEKHRLAME THGLTPYHRT SFHFKPKQLD LF
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