Gene CHU_2822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2822 
SymbolfixC 
ID4184186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3219389 
End bp3220630 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content41% 
IMG OID638072813 
Productflavoprotein/dehydrogenase 
Protein accessionYP_679412 
Protein GI110639203 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGGG AAAAAGTTGA TGTGTTGGTA ATAGGAGCAG GGCCTGCAGG AACTGTTGCT 
GCTTCGTTAG TTAATAAAAG TGGTTTCAAG GTGAAAATTG TTGAGAAGCA AAAGTTTCCG
CGCTTTGTTA TTGGAGAAAG TTTATTGCCA AGATGTATGG AGCATCTGGA TGAAGCGGGT
TTCCTGGATG CCGTGAAGGC ACAAGGATTT CAGCAAAAAT TCGGAGCAAA GTTTGTACGC
GGAAAAGAAA TTGCTGACTT TAATTTCTCG GATCAGTTCT CTAATGGATG GAACTGGACC
TGGCAGGTAC CGCGTGGGAA TTTTGATAAA ACCCTTGCCG ATGAAGCTGC CAGACAAGGT
GTTGATGTAG AATATGAAGT TGGTGTTACA GATATTAAGT TTTTTGGTAC GGATTCCGTT
ACTACAATAG AAGATATTAA CGGCAACAAA AGAGAAATAG AAGCACGGTT TATTATTGAT
GCAAGCGGCT ACGGACGTGT AATACCACGT ATGTTTGGTT TGGACAAACC ATCAGGATTT
GAATCCAGAA GAACATTATT CACGCACATT AAAGATGTAA AACGTCCGGT TGCTGCAGAA
ATGGAAGGCA ATAGAATTAC AGCCGTAGTG CATAAACCAA AAGTATGGAT CTGGGTAATT
CCTTTTTCAA ATGGTAATAC ATCTGTTGGT TTTGTAGGCG AGCCTTCTTA TTTCGATGAA
TACACGGGTA CACCCGAAGA AAGAATGCGT GCCATGATTG CGAATGAAGG ACATATAGCA
GAACGTTTCA AAAGTGAAGA ATTTTTATTT GAACCAAGAA CCATTGAAGG GTATGCAATC
TCTGCAAGTA AATTATATGG TGATGGTTTT GTGCTGACTG GAAATGCAAC CGAATTCCTG
GATCCGATAT TTTCTTCCGG AGCTACTTTT GCTATGGAGT CAGGTTCAAA AGGCGGGAAG
CTGGCTGTTC AATTCCTGAA AGGCGAAGAA GTAAACTGGG AAAAAGATTT TGTAGAACAC
ATGATGCAGG GTATCGATAC ATTCCGTTCG TTTGTAACAG GCTGGTACGA TGGAACACTG
CATGCTGTAT TCTTCGCGAA GAACCCGGAT CCGGATCACA AACGTATGAT CTGTTCTGTA
CTTGCAGGTT ACGTATGGGA TAAAAATAAT CCTTTTGTAA AAAAACACAA TACAATTCTG
AAAACCTTAG CTAAGGTCAT TCAGATGGGT GAAGAGGCAT AA
 
Protein sequence
MQREKVDVLV IGAGPAGTVA ASLVNKSGFK VKIVEKQKFP RFVIGESLLP RCMEHLDEAG 
FLDAVKAQGF QQKFGAKFVR GKEIADFNFS DQFSNGWNWT WQVPRGNFDK TLADEAARQG
VDVEYEVGVT DIKFFGTDSV TTIEDINGNK REIEARFIID ASGYGRVIPR MFGLDKPSGF
ESRRTLFTHI KDVKRPVAAE MEGNRITAVV HKPKVWIWVI PFSNGNTSVG FVGEPSYFDE
YTGTPEERMR AMIANEGHIA ERFKSEEFLF EPRTIEGYAI SASKLYGDGF VLTGNATEFL
DPIFSSGATF AMESGSKGGK LAVQFLKGEE VNWEKDFVEH MMQGIDTFRS FVTGWYDGTL
HAVFFAKNPD PDHKRMICSV LAGYVWDKNN PFVKKHNTIL KTLAKVIQMG EEA