| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2809 |
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| Symbol | |
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| ID | 4187194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 3204677 |
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| End bp | 3207829 |
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| Gene Length | 3153 bp |
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| Protein Length | 1050 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638072800 |
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| Product | cation efflux protein |
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| Protein accession | YP_679399 |
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| Protein GI | 110639190 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.354726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATTA CAGAAATATC CATAAAAAGA CCATTACTGA TTACAGTAAT TTTCTTTACG
TTGATCCTCT TCGGATGGAT CAGTTACAAA AGTTTAAATT ATAATTTATT GCCTAAGTTT
GAGGTAAATG TAATTACAGT TCAGACGATA TACAGAGGTG CTTCTTCAGA CGAGATCCAG
AGTTCGATCA CCAAACCGGT AGAAGATGCC GTTGCATCTA TTGAAGGTAT TGATGTGATC
ACTTCTACAT CTATGGAAGG TGTATCAATG ATCGTACTTC AGCTGAAGCC CGGTACAAGC
ACTATTAATG CACAACGGGA TGCAGAAAGA AAAATCAATG AAATTAAAGC AACCCTGCCG
GATGATGTAG ATGATCCGGT AATCAGACGT GTTAACCTCG ACGAAATTCC GGTATTGAAA
ATCAGTGCTA CGGCAAATAT GACGCAAGGA CAGCTCTATG ATCTGATTGA TCAGAAAGTA
AAGCCTTTGA TGCTGAATGT TGAAGGGGTT GGTACAGTAA GTATCATTGG TGGAAATGAA
CGTGAAATCA AGATTACGCT TGATAATGAT AAGCTTCAGG CATACGGAAT TTCTTCTGCA
TTGGTGAACC AGATCATTGC CAACAGTAAC TCTTCATACC CTGCAGGTAG TGTAGAAACT
ACAGACGACC GTTTATCTAT CCGTATGAAT GCAAAAGTTA CTACGGTAGA CGAATTAAGA
AATCTTGTTA TTACTGAAAA TAAAGACGGA AGCCGTGTAT TGGTTAAAGA CGTTGCAACA
GTAACTGACG GGCTTGCTGA ATCAACAACA ATTAACCGTA TCAACGGACA AAGCGGTATC
GGTATTGAGA TCATTAAACA ATCCGATGCG AATACAGTAA ATGTAAGCCA GAATGCGAAG
AAACGTCTGG AAGAATTAAA AGTGTTATAT GCTGCACAGG GATTTAATTA TCAGATTGCA
TCCGATCAAT CTGTTTATAC GCTTGCTTCT GCTGATGCCG TAATCCACGA TTTGTTCCTG
GCTGTACTTA TTGTAGGTAG TGTAATGTTA TTGTTCCTGC ACAGCTTCCG CAGTTCATTA
TTTGTTCTTG TTGCCATTCC ATCTGCAATG ATCCCGACAT TCATCCTAAT GTATGTGTTT
GGATTCTCGC TGAACCTAAT GACATTGATG GGCCTTTCCC TTGTTGTTGG TATTCTTGTG
GATGATAGTA TTGTGGTATT GGAAAACATT TTTCGTCACC TTGAAATGGG TAAAAATAAA
GTTCAGGCAT CTTTAGATGG CAGAAGTGAA ATTGGTTTTA CAGCTATTGC GATTACACTG
GTAGACGTTG TGGTATTCTT ACCGCTGTCG TTAAGTACCG GTATCATCGG GAATATTCTT
CGTGAATTCT CTTTGGTAGT AGTATTCTCT ACATTGATGA GTTTATTTGT ATCCTTTACC
CTTACTCCGC TCCTTGCGTC AAGATGGGCA AAGCTGGAAG TATTAAGCAA AGATTCTCTA
TGGGGGCTGA TCAATATTAA GTTTGAAGAG TTCTTAACAA GCCTGAAAGA AGCTTACGGC
AGAGGATTAT CGTGGGTACT TAAACGCGGC CATAAAAGAT GGGTACTTAT CAGCATATTT
TTGTTGTTTG TTGGTGTAGG AGGTCTTCTG GCCGGCGGTT TCATTGGCGC TGCATTTATC
AGTGCCGGTG ACCGCGGAGA ATTTGCGATC AAAGTTGAAC TCGCCCCTGA AACACCTTTA
TACCAAACAA ATTTAAAAGT AAAACAGATT GAAGAAATCT TATTGTCCCA ACCGGAGGTA
ACGAAGGTAT TTACCAATGT AGGTACCCAA TCGGGTGCCA TGGGCGGCGG ATCTTCCAAT
TCAAATCTTG CAGAGATCAC GGTAACCCTT GTAGATAAGT CTGAACGTGC GTTATCGGCC
GATAAGTTTG GTGTTGAAAT GCGCAATAAG ATCGGAGAAA TACCAGGTAT TAAAGTTACT
GTATTGCCGG TAAGTATTAC CGGTAACAGC CAGTCTCCGA TTCAGATTGC TGTGAAAGGT
ACCGATATGG ATAGCTTATG GAAGGCTGCA CGAATGCTCA AAGAAATTGT TGTAGCAACA
CCGGGTACCG ATTATGTGGA TTTCAGCACA AAAAGTTTAA AGACTGAAAT TGACATTAAA
TTAAACAGAG ATAAATTATC GAATATTGGC ATGAGTATAC CTGAAGTGGG TAATGCTATA
CAGCTTGCCT TCAGGGGAAA TGACCAGACA AAATTCAAAG ACAAAGGTGA AGAATACAGC
ATCAATGTTT CGCTTGACAA AGACGATAAA CGCGACATTG AAAGTGTAAA AAATCTGATC
ATCCGAAACA GTCAGGGCGC TTCAATCCGT TTGGGTGATG TAGCAGAAGT TTCTGAAATA
CTTGGCCAGT CTGTATTAGA GCGGACCAAC CGTATGAACT CTATTAAAGT AACATCTGCA
GCTGTTGGCC GCCCTTCGGG AACAATTGTT GCCGATATTC AGGCGGCCCT TGAAAAACAG
AAACTTCCGG AAGGTATTCT GATCGATTAT CAGGGTGATG CAAAAAACCA GAAAGATGCC
TTTGGAAGTC TTGGAATGGC TATGTTAATG GGTATTATCC TCGTTTATCT GATCATGGTT
GCCTTGTATG AAAGCATTGT TTATCCATTT GTGGTATTAT TTTCTATACC TGTGGCAATG
ATTGGTGCCT TTTTAGCGTT AGCATTAAGC ATGGAGACAA TGTCTATCTT TGCGATCGTC
GGGTTGATCA TGCTTCTTGG TTTGGTTGCT AAAAACGGGA TTCTGATCGT CGATTTTACC
AATCACTTAA AAGCAGAAGG TATGTCTCGC TTTGATGCCT TGGTAGAAGC AGGTAAAGAA
CGTTTGAGAC CGATCCTGAT GACTACGATA GCTATGATTA CGGGTATGCT TCCGATTGCG
CTAGCTACCA GCTCAGGTGC CGAAGTTAAA AATGGTATGG CCTGGGTAAT TATCGGCGGC
CTTACCAGTT CATTAATATT GACCCTGTTC CTGGTACCGA CTATGTATAT GATTATTGAT
ACAGCAATTG AACGGGTAGA AAAATTCTTC AGAAAGCGTT TTTTCAAAAA AAGCAGAAAA
GAATTATTGG CGAAAGAAAC GATTGATTAT TAA
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| Protein sequence | MSITEISIKR PLLITVIFFT LILFGWISYK SLNYNLLPKF EVNVITVQTI YRGASSDEIQ
SSITKPVEDA VASIEGIDVI TSTSMEGVSM IVLQLKPGTS TINAQRDAER KINEIKATLP
DDVDDPVIRR VNLDEIPVLK ISATANMTQG QLYDLIDQKV KPLMLNVEGV GTVSIIGGNE
REIKITLDND KLQAYGISSA LVNQIIANSN SSYPAGSVET TDDRLSIRMN AKVTTVDELR
NLVITENKDG SRVLVKDVAT VTDGLAESTT INRINGQSGI GIEIIKQSDA NTVNVSQNAK
KRLEELKVLY AAQGFNYQIA SDQSVYTLAS ADAVIHDLFL AVLIVGSVML LFLHSFRSSL
FVLVAIPSAM IPTFILMYVF GFSLNLMTLM GLSLVVGILV DDSIVVLENI FRHLEMGKNK
VQASLDGRSE IGFTAIAITL VDVVVFLPLS LSTGIIGNIL REFSLVVVFS TLMSLFVSFT
LTPLLASRWA KLEVLSKDSL WGLINIKFEE FLTSLKEAYG RGLSWVLKRG HKRWVLISIF
LLFVGVGGLL AGGFIGAAFI SAGDRGEFAI KVELAPETPL YQTNLKVKQI EEILLSQPEV
TKVFTNVGTQ SGAMGGGSSN SNLAEITVTL VDKSERALSA DKFGVEMRNK IGEIPGIKVT
VLPVSITGNS QSPIQIAVKG TDMDSLWKAA RMLKEIVVAT PGTDYVDFST KSLKTEIDIK
LNRDKLSNIG MSIPEVGNAI QLAFRGNDQT KFKDKGEEYS INVSLDKDDK RDIESVKNLI
IRNSQGASIR LGDVAEVSEI LGQSVLERTN RMNSIKVTSA AVGRPSGTIV ADIQAALEKQ
KLPEGILIDY QGDAKNQKDA FGSLGMAMLM GIILVYLIMV ALYESIVYPF VVLFSIPVAM
IGAFLALALS METMSIFAIV GLIMLLGLVA KNGILIVDFT NHLKAEGMSR FDALVEAGKE
RLRPILMTTI AMITGMLPIA LATSSGAEVK NGMAWVIIGG LTSSLILTLF LVPTMYMIID
TAIERVEKFF RKRFFKKSRK ELLAKETIDY
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