| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2777 |
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| Symbol | rfbX |
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| ID | 4186266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 3161181 |
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| End bp | 3162422 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638072766 |
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| Product | O-antigen transporter |
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| Protein accession | YP_679368 |
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| Protein GI | 110639159 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.273029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATAAAA AAACACTTAT AAGTACATTT GTTGTGCGCT TCATTCTGGC GCTGAATACG
TTTGGCATAT TCATTCTGTC TTCCAGATAC CTCGGGGCAG ACGGCAGAGG TACCATAAGT
CTGTTTATTG CAAACGTTAC CATTGTTCAA TTATTCAGTG AAGTGATTTT TGGTTCGGGC
TATATTTATT TTATTCATCA ATACAGTAAA AAAGATATTA TCACGTACGG GTTTATCCTT
TCAACACTGG CAGGAATACT CGTTCCGCTG ATTTTATATG TTACGGGGCT GCATCCGGCA
GGTTTAGTTA CTGACCTGAT CATCAACAGC ATCTTATTTG CGTGGGTCAA CTGGATCGGC
CTGCATTTAC GGGCGCACAA AAAATTCGCG TTCTACAATG CCTTCTATTT GTTTTTATCT
GTCTTTCAGC TAACACTGAT CTGGCTGATG CTGGAACAAA AAGCTACCAT ACAGCAATAC
ATCAACGGTC TTCAGATTCA TCTGGCTATC TGCTTTGCCG TTGGGCTATT ATTTTTGTGG
GCCGTATCTA AACATACAGT ACAATCAACG CATGCACCCG TGCATTGGTT TGAACTCATT
AAAAAGAGTA TCATATCGCA ATACAGCAAC TGGCTTTTCT TTTTAAATAC CCGTATCAGT
TATTATTTGA TTTATGTGTA CATAAAAGAT AATACTTTAT TAGGAATTTA TTCGGCGGCA
TCGATTTTAA CAGAGGCGGT ATGGATCATA CCCCTTGCGT TGGCAACACC ACTCTACCCG
ATCATTTCTT CCGACCCCGA TAAAGAAAAA ACCGTTCAGC TTACAAATGA ATATGCGTAT
GCTTCTTTTT GGTTAAGCCT TGCCGCCACT GTTCTTTTAT TGCTGGTTCC GGAAGCGGTG
ATGGAATTTG TAATCGGGAA AGACTTTACC GGACTGCATA GCTTTATTTT AGTATTAGCT
GCAGGCACGG TTATTCTATC GTATGCAAAA ATCTACTGGA ATTATTTTCA GGGAATGGGT
TTATTTAAAA TCAATGCGAA AGCAACCTTG ATTTCTTTTG TTGTTCCCCT GCTGCTGTTT
GTGCCGTTTA TTCCGATGCT GGGTGTGTAC GGAATCGCAT TCATGAGCTG CTGCAGCTAT
CTCGTATACA GTTTTGTATT GATGTATTAT TACCACAAAG AAACACACAC CAGCTGGAAA
GCTTTATTAT TACCGGGTTT CCGCTTGTTT CCAAACGTGT AA
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| Protein sequence | MHKKTLISTF VVRFILALNT FGIFILSSRY LGADGRGTIS LFIANVTIVQ LFSEVIFGSG
YIYFIHQYSK KDIITYGFIL STLAGILVPL ILYVTGLHPA GLVTDLIINS ILFAWVNWIG
LHLRAHKKFA FYNAFYLFLS VFQLTLIWLM LEQKATIQQY INGLQIHLAI CFAVGLLFLW
AVSKHTVQST HAPVHWFELI KKSIISQYSN WLFFLNTRIS YYLIYVYIKD NTLLGIYSAA
SILTEAVWII PLALATPLYP IISSDPDKEK TVQLTNEYAY ASFWLSLAAT VLLLLVPEAV
MEFVIGKDFT GLHSFILVLA AGTVILSYAK IYWNYFQGMG LFKINAKATL ISFVVPLLLF
VPFIPMLGVY GIAFMSCCSY LVYSFVLMYY YHKETHTSWK ALLLPGFRLF PNV
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