Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2773 |
Symbol | pfkA |
ID | 4186262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3157905 |
End bp | 3158891 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638072762 |
Product | 6-phosphofructokinase |
Protein accession | YP_679364 |
Protein GI | 110639155 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0205] 6-phosphofructokinase |
TIGRFAM ID | [TIGR02482] 6-phosphofructokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00187778 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.467717 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAA TAGCAGTATA TACATCTGGG GGCGATGCGC CAGGAATGAA TGCATGTATT CGCGCGGCGG TTCGTGCGGG TCATTACCAT AATCTTGAAG TTTATGGTAT TGTTCGTGGA TATGACGGGA TGATTAATGG GAATTTTATC GAACTTGACA ATCGTGCTGT TAGTAACATT ATTCAAAAAG GCGGAACGAT TCTAAAATCT GCGCGCAGCG AAGAATTCAG ATCTCCGGAG GGAAGACGCA AAGCGTTCGA TCAGATTCAG AAATTCGGTA TCGACGGTTT GGTTGCCATT GGCGGTAACG GAACATTTAC CGGAGCTGAA TTATTTTACA ATGAATATCA AATCCCTTGT GTTGGCGCAC CGGGAACAAT AGATAATGAT CTGTATGGTT CTGATTTTAC CATTGGGTAT GATACTGCCG TAAACACATG TTTAGCAGCA ATCGATAAGA TCCGTGATAC GGCAGATGCA CACGAACGTG TATTCTTTAT TGAAGTAATG GGCCGTGATA CAGGCTACAT CGCTGTACGC TCGGCTATTT CAGGCGGAGC AGAAATGGCG ATTATACCCG AGTTTCCGTA TGACAAAAAT GTTGTTATCA ACCGTTTGAA ACATGGCACA AGTGACACTA AAGCATCTCA CATTATTATT GTTGCTGAAG GTCACCAGGA AGGTCGTGCA AGTATGATTG CAAGAGATAT TAAAGAAGCG CTACCTCAAT TAGATTGCAG AGTAACCACA TTAGGACACG TGCAACGTGG AGGCGGGCCA TCAGCGGCTG ATCGCGTATT AGCCAGCCGT CTGGGTCTGG CTACGGTGGA AGGCTTACTT GAAGGAAGAG CAAATGTAAT GGCTGGCATT ATCGATCATA AAGTAGTTTA TACTCCTTTT ATTGATACAA TTACCAAGAG AAAGCCGATC AATGAAGATT TACTTTCATT GGCAGAAAAA TTAAATGGCA GAAGCTATAA AGTATAG
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Protein sequence | MKKIAVYTSG GDAPGMNACI RAAVRAGHYH NLEVYGIVRG YDGMINGNFI ELDNRAVSNI IQKGGTILKS ARSEEFRSPE GRRKAFDQIQ KFGIDGLVAI GGNGTFTGAE LFYNEYQIPC VGAPGTIDND LYGSDFTIGY DTAVNTCLAA IDKIRDTADA HERVFFIEVM GRDTGYIAVR SAISGGAEMA IIPEFPYDKN VVINRLKHGT SDTKASHIII VAEGHQEGRA SMIARDIKEA LPQLDCRVTT LGHVQRGGGP SAADRVLASR LGLATVEGLL EGRANVMAGI IDHKVVYTPF IDTITKRKPI NEDLLSLAEK LNGRSYKV
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