| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2771 |
|---|
| Symbol | |
|---|
| ID | 4185909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 3154426 |
|---|
| End bp | 3156831 |
|---|
| Gene Length | 2406 bp |
|---|
| Protein Length | 801 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638072760 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_679362 |
|---|
| Protein GI | 110639153 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.181067 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAG TATCATTAAA ATCATTGCTC CCGCACGTGC TTGTGCACGT AGTATTTATA
GGGATCTTAT TTATTTTTTA CAGTCCGGTA ACAAAAGGTA AAAAACTAGT TCAGAACGAC
GTTGTACAAT CAGGCGCTGC TTTACAGGAA GCGAATGAAT ATACGAAGAG CGGAAGCGAA
GAAATTCTTT GGTCAAACTC AAGTTTCAGC GGTATGCCTG TATGGCGCGG TTATGGTTCA
AACTTAGTTA CCTCTGTCCA TAAAGCAGCA CTTGCTATCT TTCCCGTTAC CGTATACATG
AGCTATCTGG CTTTTTTAGG ATTTTATATT CTGGCGCTGG TCCTCGGAGC TAATGTAACC
ATTGCCATGC TGGTTTCAGC AGCATTTACA TTAACCTCCT TTAACATTGT AAGTATCGAA
GCGGGCCACG TGAATAAGGT ATTGGCCATG GCTACGATGG CACCGGTTAT TGCCGGAGTT
ATACTGGTAT ATGAAAGAAA ATACTGGATC GGTATATTTG TAACGGTATT TTTTCTGGCC
TTACATCTGT ATTACGGCCA TTACCAGATC AGTTATTATC TATTGATTAC ATTAGGGTTT
TATGCTGCCT ATAAAATCTA TGAGGCTATA CGTGATAAAT CTTACAAGCA TTTTTTAATC
GGATCACTTG TATTAATAGG TGCTGCAGTT GTTTCTATCC TTCCGAATAT TTCTTCTATT
CTGACAAATT ATGAGTATTC TAAAAGTACT ACACGCGGCG GTTCAGAATT AAGCGCGGCA
AAAAAAGAAG GCGGTGGTTT AGATAAAGAA TATGCAATGA GCTGGAGCAA CGGCATTACA
GAAATTTTCA CCATGTATAT GCCATACTTT AACGGAGGTG CCTCGGGTGA AGAACTGGAT
CAGAGTTCAG CAACTTACAA AGCACTGGCT TCTAAAGTAG ACAGAGCACA GGCCAAACAG
TTTATCAAAC AGATTCCGTT GTATTGGGGA GATCAGCCAT TTACTTCCGG TCCGGTATAT
TTTGGCGCAA TCATTATATT TTTATTTATA TTCGGAATGT TTTTAATCAA AGATCCGTCT
AAATGGATCT GGCTGGCTAT TGCCGTTTTC TCATTCATGA TGAGCTGGGG TAAAAACATC
GAATGGTTCA GCGATTTATT ATTCTATCAC GTGCCGCTTT ATAACAAGTT CCGTTCCGTA
ACAATGGCTG TATCCATTGC ACAGCTTGTG TTTCCATTGC TGGCATGTAT TGCACTGGTT
AAAGTTATCC AGCCTGAATT GGAAAGAGAT CAGGCACAGA AAGCATTGGT GAAAGCATTT
GCGATATGCG GAGGCTTTGC CGTATTGATG CTTCTTACAG GTACCATCTG GTTTAATTTC
TCATCTAAAA ATGATGCAAA CACGCAATTG CCGGAATGGT TGATGGAAGC GATTACCGAA
GACCGTATAT CTAAATTCAG AGGAGATGCA CTTCGTTCGC TGTTTTTTGT AACAGCAGCA
GCAGCATTGA TTTGGGCAAT CATCAAAGAG AAGTTTGAAA TAAAATATGC GCTGGCTGCA
TTAACCGTTT TAGTAATTCT TGATCTGTTT GTAGTGGACA AACGTTATTT GAATGAAAGC
GATTTTATAA AAGCAAAAGG ATCTATTGTT GAAAAAGCAA TTCCTAAAAC AGAACAGGAT
CAGCAGATAT TAACAGACAA AGGGTATTAC AGAGTGTTAA ATCTTACCAA GAGTCCGTTT
AATGATGCAA CAACATCCTT TTATCACAAG TCTATTGGCG GCTACAGTGC CATTAAATTG
TCACGCTATC AGGATTTGAT TGAAAACCAG ATCAGCAAGA ATAACATAGA AGTAATGAAC
ATGCTGAATA CACGCTATAT TATTTCCGGA GCACGCCAGG AAGGCGGAGA GCCTATGGTA
CAGCGTAACC CCGGTGCGTA TGGCAATGCC TGGTTTGTAA AAGAAACAAA AATTGTTGCA
AATGCAGATG AAGAAATAAA AGCATTAGAT AGTATCTCAC CAAAGACAGA AGCCTTTATT
GATCAGCGTT TTGCTAAAGC AGGAAAAGCA TACACCTTAG ATTCTTCTTC ATACATTACA
TTAACGGAAT ACCACCCGAA CCATTTAACC TATGAAAGCA GTGCTGCATC CGAACAATTT
GCCGTATTCT CGGAAGTATA CTACCAGCCG GGCTGGAATG CATATGTAGA CGGAAAACCA
ACACCGCATG TACGTGTAAA TTATATTCTG CGTGGTATGG AGCTTCCTGC AGGCAAACAT
AAGATCTTAT TCAAATTCGA ACCGGAGCAT TATATCCGAA GCGAAAAAGT AGCGTACGCC
GGATCTCTTT TCTGGATCGC ATTATTACTG GGAACATTGG TTATGTCGTT ACGCAAAACC
AAGTAA
|
|---|
| Protein sequence | MKSVSLKSLL PHVLVHVVFI GILFIFYSPV TKGKKLVQND VVQSGAALQE ANEYTKSGSE
EILWSNSSFS GMPVWRGYGS NLVTSVHKAA LAIFPVTVYM SYLAFLGFYI LALVLGANVT
IAMLVSAAFT LTSFNIVSIE AGHVNKVLAM ATMAPVIAGV ILVYERKYWI GIFVTVFFLA
LHLYYGHYQI SYYLLITLGF YAAYKIYEAI RDKSYKHFLI GSLVLIGAAV VSILPNISSI
LTNYEYSKST TRGGSELSAA KKEGGGLDKE YAMSWSNGIT EIFTMYMPYF NGGASGEELD
QSSATYKALA SKVDRAQAKQ FIKQIPLYWG DQPFTSGPVY FGAIIIFLFI FGMFLIKDPS
KWIWLAIAVF SFMMSWGKNI EWFSDLLFYH VPLYNKFRSV TMAVSIAQLV FPLLACIALV
KVIQPELERD QAQKALVKAF AICGGFAVLM LLTGTIWFNF SSKNDANTQL PEWLMEAITE
DRISKFRGDA LRSLFFVTAA AALIWAIIKE KFEIKYALAA LTVLVILDLF VVDKRYLNES
DFIKAKGSIV EKAIPKTEQD QQILTDKGYY RVLNLTKSPF NDATTSFYHK SIGGYSAIKL
SRYQDLIENQ ISKNNIEVMN MLNTRYIISG ARQEGGEPMV QRNPGAYGNA WFVKETKIVA
NADEEIKALD SISPKTEAFI DQRFAKAGKA YTLDSSSYIT LTEYHPNHLT YESSAASEQF
AVFSEVYYQP GWNAYVDGKP TPHVRVNYIL RGMELPAGKH KILFKFEPEH YIRSEKVAYA
GSLFWIALLL GTLVMSLRKT K
|
|---|
| |