Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2745 |
Symbol | murE |
ID | 4185335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3129242 |
End bp | 3130702 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638072735 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
Protein accession | YP_679337 |
Protein GI | 110639128 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.133178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATAA AAGATTTAAT ATATAAGGTC TCTTTAATAT CAGTATCCGG AAGAACGGAT GTAGATGTTA CTGCTATTTG TTTTGATTCG CGCAAAGTTG AGAAAGGTTC TATGTTTATT GCTGTAAGAG GCGTAAGCAG CGACGGACAT TCATTTATTG CAGACGTTAT TCAAAAAGGT GCTACTGCTG TTGTATGTGA AGAGCTGCCG GAAATTGAAT CTACTGCTGA CTGCACGATC ATTCAGGTAA AGGATAGTGC GGAAGCTCTG GGTATGATCG CTTCTAATTT TTACGATTCA CCTTCGTCTA AATTAAAATT GGTAGGTGTA ACAGGTACAA ATGGTAAAAC GACTACAGTA ACCTTACTAT ACCGCTTGTT CAGAAAGCTG GGTTATAAAA CGGGATTGCT TTCAACTGTA GAAAATATTA TTGAAGATAA AGTCGTGCAG GCTACACATA CCACACCGGA CGCTATTTCT TTAAATAAGC TGCTGGCAGA TATGGTGAAG GCCGGCTGTA CACATTGCTT TATGGAAGTG AGTTCGCATG CTGCTGTACA AAGACGTATT GCCGGTCTGC AATTTGCTGG TGGTTTGTTC AGTAATATCA CACATGACCA TTTAGATTAT CACAAAACAT TTGACGAATA CATCAAAGCG AAAAAATTAT TCTTTGATGG TTTACCGAAT GATTCATTCG CGCTGATTAA TTCAGACGAT AAAAGAGGCC GGGTAATGAT TCAGAATACA CGTGCTAAAA CATATACGTA TTCATTACTT GCCTTAGCAG ACTTTAAAGG GAAATTAATT TCTACTACCA TGCAGGGTTT GGAAATGGAT GTAGACGGTA TACAGGCCTG GTTCAGGCTG ATCGGTAATT TCAATGCATA CAATTTATTA GCCGTGTATG CAACAGCCGT ATTACTGGGT GAAGACAAGG AAGAAGTGTT GATGCAGCTT TCAACTATTG AAGCTGCAAA TGGCAGATTC GAACAGCAGA TATCTGCAAC ACGCATTACC GTGATTGTTG ATTATGCACA TACACCTGAT GCATTAAAAA ATGTATTGGA AACAATTACA GAATTAAAAG GAGCAAACAA AATTATAACA GTTGTTGGGT GTGGTGGTAA CAGAGATGCT GCAAAGCGCC CTGTGATGGC AGACATCGCA TGCCAGTTCA GCGACCATGT TGTATTAACG TCTGATAATC CACGTAACGA AGAACCTCAG GCCATTCTTA CTGAAATGGA AAAAGGCGTT CGTATTGTAG ACAAGAAAAA AGTTCTGTCT GTACTGGATA GAAAAGAAGC GATAAAAGTT GCCTGTACAT TGGCATCAAC AGGTGATATT ATTTTAGTTG CCGGAAAAGG CCACGAAACA TATCAGGAAA TCAAAGGGGT TAAATATCCT TTTGATGATC GTTTAATAAT AAAAGAGTTA TTAGACACTT TAGGGAAGTA A
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Protein sequence | MQIKDLIYKV SLISVSGRTD VDVTAICFDS RKVEKGSMFI AVRGVSSDGH SFIADVIQKG ATAVVCEELP EIESTADCTI IQVKDSAEAL GMIASNFYDS PSSKLKLVGV TGTNGKTTTV TLLYRLFRKL GYKTGLLSTV ENIIEDKVVQ ATHTTPDAIS LNKLLADMVK AGCTHCFMEV SSHAAVQRRI AGLQFAGGLF SNITHDHLDY HKTFDEYIKA KKLFFDGLPN DSFALINSDD KRGRVMIQNT RAKTYTYSLL ALADFKGKLI STTMQGLEMD VDGIQAWFRL IGNFNAYNLL AVYATAVLLG EDKEEVLMQL STIEAANGRF EQQISATRIT VIVDYAHTPD ALKNVLETIT ELKGANKIIT VVGCGGNRDA AKRPVMADIA CQFSDHVVLT SDNPRNEEPQ AILTEMEKGV RIVDKKKVLS VLDRKEAIKV ACTLASTGDI ILVAGKGHET YQEIKGVKYP FDDRLIIKEL LDTLGK
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