Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2729 |
Symbol | |
ID | 4185259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3112572 |
End bp | 3114002 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638072719 |
Product | hypothetical protein |
Protein accession | YP_679321 |
Protein GI | 110639112 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.585762 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAA TACGTATAGC AATCTTGATT CTTCTATCTG CGTTTACTGC AGTTGCACAA CAGGATACTA TTATACCGCC TGCTAAAAAA GAAATCAAAC CTCAGGTTAT AAAGCCATTG AGAATAGCAT TGAATGAAGA TGGCAGTCAT TATGTACAAT TTACCGGATT GCTTCAGGCT TGGGTCAGAT ACAATGAAAA TAATCCGGGG AGTACAATTA ACGGACAAGC TGCAAATGCT GAAAATACCT TTGACGTAGG TTTGAGACGC GTACGTTTTC AGGCTTTTGC GCAATTAACG GATCGTGCAT TTTTCTACAC ACAGGTTGGG CAAAATAGTT TTGGATTTAC TTCTGAACGG AAGTTCGGAT TGTTTTTAAT GGACGCAACA GGTGATTATG AATGTATTAA AAAACATTTA TCTATTGGCG CCGGTTTAGG TTCATGGGTT GGGCCGCTTC GTTATTCATC GCTGGCTGTA GCTTCAATAA TGGGCATGGA TGGAATGATT TATCAGCAGA CAACAAATGA TCTGAACGAT CAGTTTGTAC GTCGGATGAT GATATATGCC AAAGGTAAAA TAGGTAAACT CGATTATCGT GTCAGTATTG CAAAACCATT TCTTGTAAAT ACAGCAGCAA ATAAAAGCGG AACGGGCCAG GCAGGTATCG GAGAGCTGGG AAACATGCAG AATAACGTTG CAACATTTTC TACCAGAAAC CCAAATCCTC AGTTGAATAC CTACATGGCG TATCAATTCC TGGATCAGGA AGCAAATAAA AATCCCTACA TGGCAGGAAC CTATCATGGG ACAAAAAAAA TATTCAATAT CGGCGTCGGA CTGCAATACC AGAAAGATGC TATGTGGTAT AAAGAAGCGA ATGCTTCAGC ACCAGGCGGA GCAGATACAA TAACACATCA ATATGTTACA CTTGGTATTG ACGTAATGTA TGGCGCACCA CTGAATAAAG AAACCAATAC AGCAATCAGT TTTTATGCGG CATATTTATA CAGCGATTAC GGAAGAAATT ATGTGCGTAA TCTGGGTGTG ATGAATGCAG CGGATGGCGG ACAAGCATAC AGCGGAAGAC CCGGCACGTA CACAAGCGGC GGGGGGAGTG CTTTTGCCAT GAATGGTACC GGAAGCACCT TCTCTGCACA GCTTGGTTAT AAGATGAAAG ATAATTTGCT TGGCGAACAC GGTACCCTGA TGCCGTATGC AATGACACAG GTTTCAGGAT TTCAGTTTTT CAACTACAAA CCTATGACGG TATTTAATGT GGGTATAAAC TGGCTGATGA AAGGACATAA CTCTAAAATA TCAGTTGATT ATCAGAACAG GCCATTCTTT GCACAGGCAA CGCTGGCTGA TGCTCCTGAA CAGACAACGC GCAAGGGAAT GTTTGTATTG CAATATCAAT TGATGTTTTA A
|
Protein sequence | MKKIRIAILI LLSAFTAVAQ QDTIIPPAKK EIKPQVIKPL RIALNEDGSH YVQFTGLLQA WVRYNENNPG STINGQAANA ENTFDVGLRR VRFQAFAQLT DRAFFYTQVG QNSFGFTSER KFGLFLMDAT GDYECIKKHL SIGAGLGSWV GPLRYSSLAV ASIMGMDGMI YQQTTNDLND QFVRRMMIYA KGKIGKLDYR VSIAKPFLVN TAANKSGTGQ AGIGELGNMQ NNVATFSTRN PNPQLNTYMA YQFLDQEANK NPYMAGTYHG TKKIFNIGVG LQYQKDAMWY KEANASAPGG ADTITHQYVT LGIDVMYGAP LNKETNTAIS FYAAYLYSDY GRNYVRNLGV MNAADGGQAY SGRPGTYTSG GGSAFAMNGT GSTFSAQLGY KMKDNLLGEH GTLMPYAMTQ VSGFQFFNYK PMTVFNVGIN WLMKGHNSKI SVDYQNRPFF AQATLADAPE QTTRKGMFVL QYQLMF
|
| |