| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2714 |
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| Symbol | yiaD |
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| ID | 4185244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3099199 |
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| End bp | 3101145 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638072704 |
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| Product | outer membrane protein |
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| Protein accession | YP_679306 |
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| Protein GI | 110639097 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.882447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGT ATAAGAAGAT TTTTTATTTC AGTACGATTT TGTTTTTTTA TTCAGGTTTT
AGTTACGCAC AAAACATCAA TCTGTTGCTC CGCAAAGGCA ACACCTGTTA CAGAAAAGGA
CAGTATAAAA ATGCTGCTCC TTATTATGAT CAGGTACTGA AAACGGACCC TGAAAATATA
CAGGCACTTT ATAAAAGCGG TGTTTGTAAT TTATTCCGCT ATTCAAAAGA ACAGGCATTA
ATCAATTTCG AAAAGGTTTT ACAAAAAGAT TCTTCCTACG ATAAATATCT TTATTATTGG
CTGGGCAGGG CAAATCAATT GAATTTCAAT TTTGATCAGG CAGATTTTTT TTATACTGCT
TTTCAGCAGA AAACATCAAA AAACAAAATT CAATACAAGG AAGCTGATCG ATATAAATAT
CAACTGAAAT GCGCGCGCAA TTTTGTAGCC AATCCTGCAA ATTACAAGAT CCAGAATTTA
GGTGCTGCGG TTAATTCAAG CTTTTCAGAT CACAGTCCTG TTGTTTCATA TACGGATACC
CTATTATTCT TTACTTCCCG CAGGGTAACA AATACAGAAG CAAAAGAAGA ACACGATGGT
GAACCGTTCG AGGATATTTT TTATTCCTAT AGAAATTCAA CAGGCGAATG GAGCAAACCT
GAACTGTTCC ATTTGAACAC AAGCGGACAC GATGCTACCA TTCAGCTGTT TGATAATGAT
ACTAAAATTT TTATCTACAG TTATTTACAC GATGGAGATA TTTTACTGGC TCATAAAAAT
GCCGGAACAT GGAGTACGCC TGTGCCTGTA AAGGAAATTA ATTCGGCAGA TTTTGAATCC
GATGCTTTTA TGACCGCAGA TGGGAAAACA CTCTACTACG CTACCAATCA TTTTAAAAAG
AATGGTGATC TGGATATTTG TTTCATTACG AAAAAGGACG ATAACACCTG GAGCAAACCG
CAGACCTTGT CTTCACTAAT CAATACAGAT GAAGATGAAG ACGCCCCGTA TATTTCTGCA
GATGGTAAAA CCATGTACTT CAGTTCAAGA GGACATACAT CTATGGGCGG GTATGATATT
TTTAAATCAG AACTGGATTC AGTAACAGGT CAGTGGCAAA AACCTGTAAA CCTTGGTTAT
CCTGTCAATA CACCCGATGA AGATTTATAC TTCTGCTTGT CTGCTAAAAC AAAGCGTGCA
TTTATGTCAT CTTACAGAAC CGGCGGTTTT GGAGAAAAAG ATATTTACGA AATAATACCG
GTTAAAAATA TTCAGCTGCT TGGCTCCGTA ATGAAAGGCG ATACCAGCAC GCCGTTTCCA
AATGTTACCA TGCAGTACAT ACCCATGGCA GGCGCCATGA AGGGAGCTCA AAAAACTCAG
GTAAATACAC TGGCCGATGG AACATATACA ACAGAATTAT TATCCGATAA TGCTTATCTG
GTTTACATCA GTCAAGGCAA GGATACGTTG TTGAAAGATA CATTGGTTTT ACCGCTCAAT
GAGTTTGATC ATTATGTGTA TAAACAACTC TACATACTGA ATATCCACGA CACGGCAGCG
GTTAAAGATT CTGTCATTCA TAAAGTAACA GATACAATTA AAACGATTGC TGCAGCAGAA
ATTGCCAAGA CCGTTTATTT TGAAAGCAAC CGTGCAGATC TTAATGCTGA AGCAAAAACA
GAATTGAATC AGCTGGGGAT TTATCTGGAT ACACATAAAG AAGCAAACGT ATATATCTCA
GGCCACGCAG ATGCATTAGG TTCAGCGGCA ATCAATAACG CACTTTCTCA GAAAAGAGCA
CAGGCAGCGG CTGTTTATTT AAAAGCGAAA GGTATTTCTG CCGCACGTAT CAAAGTGGAA
TCGTTTGGCT CTGAAAAACC TGTTGAAACG AATGCTACAG TTGAGGGACG CGCTAAAAAT
AGACGGGTAC AGATTGTAGT GAAATAA
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| Protein sequence | MNTYKKIFYF STILFFYSGF SYAQNINLLL RKGNTCYRKG QYKNAAPYYD QVLKTDPENI
QALYKSGVCN LFRYSKEQAL INFEKVLQKD SSYDKYLYYW LGRANQLNFN FDQADFFYTA
FQQKTSKNKI QYKEADRYKY QLKCARNFVA NPANYKIQNL GAAVNSSFSD HSPVVSYTDT
LLFFTSRRVT NTEAKEEHDG EPFEDIFYSY RNSTGEWSKP ELFHLNTSGH DATIQLFDND
TKIFIYSYLH DGDILLAHKN AGTWSTPVPV KEINSADFES DAFMTADGKT LYYATNHFKK
NGDLDICFIT KKDDNTWSKP QTLSSLINTD EDEDAPYISA DGKTMYFSSR GHTSMGGYDI
FKSELDSVTG QWQKPVNLGY PVNTPDEDLY FCLSAKTKRA FMSSYRTGGF GEKDIYEIIP
VKNIQLLGSV MKGDTSTPFP NVTMQYIPMA GAMKGAQKTQ VNTLADGTYT TELLSDNAYL
VYISQGKDTL LKDTLVLPLN EFDHYVYKQL YILNIHDTAA VKDSVIHKVT DTIKTIAAAE
IAKTVYFESN RADLNAEAKT ELNQLGIYLD THKEANVYIS GHADALGSAA INNALSQKRA
QAAAVYLKAK GISAARIKVE SFGSEKPVET NATVEGRAKN RRVQIVVK
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