Gene CHU_2680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2680 
SymboladhB 
ID4186744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3064152 
End bp3065132 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content40% 
IMG OID638072672 
Productpyruvate dehydrogenase E1 component 
Protein accessionYP_679274 
Protein GI110639065 
COG category[C] Energy production and conversion 
COG ID[COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGAAA TACAATTCCG TGAAGCGCTT CGTGAAGCGA TGAACGAAGA AATGAGAAGA 
GACCCAAATG TATTGTTATT GGGTGAAGAA GTTGCTGAAT ATAATGGTGC ATATAAAGTA
AGCCAGGGCA TGTTGGATGA ATTCGGTGCA AAACGAATCA TTGATACCCC TATTTCTGAA
TTAGGTTTTG CAGGTATTGG CGTTGGTGCT GCGATGAACG GCCTCCGTCC GATTATCGAA
TTTATGACAT TCAACTTTTC ACTTGTTGCT ATTGACCAGA TTATCAATGG TGCAGCGAAA
ATCATGTCTA TGTCAGGCGG TCAATATACA GCTCCTATTG TATTTAGAGG GCCTACAGGT
AACGCCGGAC AATTGAGTTC ACAACACTCT CAGAACTTTG AAAACTGGTT TGCAAACACG
CCGGGTTTAA AAGTTGTTGT TCCTGCAAAT CCATATGACG CAAAAGGTTT ATTAAAATCG
GCTATCCGTG ACAATGATCC TGTAATCTTC ATGGAATCTG AAGTTATGTA CGGCGATAAA
GGACCCGTTC CTGAAGGTGA ATATTTATTG CCTATCGGTG TTGCAGATGT AAAACGTGAA
GGTACAGATG TTACGCTGGT ATCTTACGGT AAAATATTAA AAGTAGCGTT ACAAGCTGCT
GAAGACCTTG CAAAAGAAGG TGTCTCTGCT GAAGTAATTG ACTTACGTAC TGTTCGTCCG
ATTGATTTTG AAGCAATCGT TCATTCAGTT AAGAAAACAA ACAGACTTGT TATTGTTGAA
GAAACATGGC CATTGGCGAG TATTTCATCT GAAATCTCTT ACCATGTACA ACGTTATGCC
TTCGACCACC TGGACTCTCC TATACTTCGT GTAACAAGCC GTGACTTACC GCTTCCATAT
GCGCCAACAT TAATCCAGGA AATCCTTCCA AATGTAAAAC GTACTATTGA TGCTGTTAAA
ACAGTTATGT ACCAGAAGTA A
 
Protein sequence
MREIQFREAL REAMNEEMRR DPNVLLLGEE VAEYNGAYKV SQGMLDEFGA KRIIDTPISE 
LGFAGIGVGA AMNGLRPIIE FMTFNFSLVA IDQIINGAAK IMSMSGGQYT APIVFRGPTG
NAGQLSSQHS QNFENWFANT PGLKVVVPAN PYDAKGLLKS AIRDNDPVIF MESEVMYGDK
GPVPEGEYLL PIGVADVKRE GTDVTLVSYG KILKVALQAA EDLAKEGVSA EVIDLRTVRP
IDFEAIVHSV KKTNRLVIVE ETWPLASISS EISYHVQRYA FDHLDSPILR VTSRDLPLPY
APTLIQEILP NVKRTIDAVK TVMYQK