Gene CHU_2679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2679 
Symbol 
ID4186743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3062206 
End bp3063999 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content36% 
IMG OID638072671 
Productouter membrane lipoprotein P61 
Protein accessionYP_679273 
Protein GI110639064 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTAA ATAGACAAAC AGTAGCATTA ATGACAGCTG GTTTGTTAGC ATTTAACTCT 
TGCTCATTAA AGCAAATGGT TAAAATGGCT AAAGACCAAG AATTAACAGT AACACCATCT
CCTTTAGAAG TTCATGGTGA TAGTGTAGCT TTTGACATAT CAGCAACACT CCCTGTTAAA
ATGTTGAAAA AGAACAAAAT ATATTCTGTT AGCACATTCT ATAAGAGTGG TGATAACAAA
GTAGAATTGG GTTCATTTGA TTTTGTGTCA ACAGATTACC CTGATGCAAA AACAACTGCT
CCGCAAATTA AAAAACACCA GGCCTTCGCT TACAAACCGG AAATTGGTAA TGGCGATTTA
CTTGCTGTTG GTACTGCTTC TAACTTAGAC AAAACTAAAA CGAAGTCTAC AGAAGAATTC
CCGATTGCAA AAGGTCTTAT TACAACATCC CGTTTAGTAA AAGATTATTC TTATGTTGCT
TATGCTGATC ACGGTTACAA CAACAAAGAA GAATTAATTG CATCTACCGT TAATTTCTAC
TTCGAACAAG GTAAATCTGT TTTGAGAAGT TCTGAAATGA AAGGCCAGAA TGCTAAATTT
TTGGATGCCT TCATTACTGC GAAACACGTT ACACGTACAA TCAGTGTAAT TGGTCAGCAC
TCTCCGGAAG GTACTGAAAC TAAAAACACG AACCTTGCAA ATGAGCGTTC AGTTGTTATT
GAGAAGTATG TTAAAGCCAG AATGAAACAT TTCAAACAGG ATTCTCTGGT AAATACAATT
CAATTTGTTA CAAAAGGTGA TATCAAGGAT TTTGAACCAA TGAAAGCTGA AATTGCTAAG
AGTACAAAAT TGACTCCTGA GCAAAAATCA GAATTATTGA ACATCATTGC TGGTAGCGGA
GATTTTACTT CAAAACAACA GCAGATCGAA AAATTGCCAT ACTACAACAA ATCAGTATTA
GCGCAATTAT ATCCTTCATT ACGTACAGCA AGAACTGAAA TCTGGACAGT AAAACCTAAG
AAAACGGATG CTCAGATTTC TTTATTAGCT GGTCAGATCA CTTCAGGTAA AGTTTCAGTG
GATACACTTT CAGTTGAAGA ATTAGGCTAT GCAGGTACAT TAACTCCTAT TCTTTCTGAA
AAAGCTGCAA TCTACGAAGC ATTAGCTAAA AAGACTGACA ACTGGGTTGC TTATAACAAC
TTAGGTGCTG TTTATGTTGA AATGGCTAAA GTTGAAGTGG ATCAAAACAA AAAAACTGAG
TTAGTAAATA AGGCTATCAA CACGTTAGAA ATGTCTATCA AAAAACAAGA TAACGGTGAG
GCTCATGTTA ACTTAGCTTC TGCTTACATC TTATCAGGTG TTAAAACATC TGCACGTGAT
GAAGCAAACA AAGCAGTAGC ATCTAATGCA TCTGACGCTG TTAAAAAAGG TGCTAACGGT
ATCTTAGGTA CTGTTGACAT CAAAGACGGT AAGTATGAAT TAGCATTACA GGATTTCTCT
AAATCTAACG ATTCAATTCA GGTTAAATTC AACACTGCTT TAGCGAGCTT ATTGAAAAAA
GATTTCAATA CTGCAAAAGC TGGTTTTGCT AACTATACAG CTGCTGCTCC AAACGACGCT
GCTGGTTTCT ATTTAGCTGC AGTTACTGCT GCCCGTCTTA AAGATGAAGC TACATTAACT
ACTAACCTTA AAAAGGCGAA ACAATTAAGC CCTAAATTTG GCGAAAGAGC TGTTTCTGAT
ATGGAGTTCT ACGATTACTG GAATTCTGAT AACTTCAAAA ATGCTTTAAA ATAA
 
Protein sequence
MILNRQTVAL MTAGLLAFNS CSLKQMVKMA KDQELTVTPS PLEVHGDSVA FDISATLPVK 
MLKKNKIYSV STFYKSGDNK VELGSFDFVS TDYPDAKTTA PQIKKHQAFA YKPEIGNGDL
LAVGTASNLD KTKTKSTEEF PIAKGLITTS RLVKDYSYVA YADHGYNNKE ELIASTVNFY
FEQGKSVLRS SEMKGQNAKF LDAFITAKHV TRTISVIGQH SPEGTETKNT NLANERSVVI
EKYVKARMKH FKQDSLVNTI QFVTKGDIKD FEPMKAEIAK STKLTPEQKS ELLNIIAGSG
DFTSKQQQIE KLPYYNKSVL AQLYPSLRTA RTEIWTVKPK KTDAQISLLA GQITSGKVSV
DTLSVEELGY AGTLTPILSE KAAIYEALAK KTDNWVAYNN LGAVYVEMAK VEVDQNKKTE
LVNKAINTLE MSIKKQDNGE AHVNLASAYI LSGVKTSARD EANKAVASNA SDAVKKGANG
ILGTVDIKDG KYELALQDFS KSNDSIQVKF NTALASLLKK DFNTAKAGFA NYTAAAPNDA
AGFYLAAVTA ARLKDEATLT TNLKKAKQLS PKFGERAVSD MEFYDYWNSD NFKNALK