| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2674 |
|---|
| Symbol | |
|---|
| ID | 4186738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 3057300 |
|---|
| End bp | 3059222 |
|---|
| Gene Length | 1923 bp |
|---|
| Protein Length | 640 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638072666 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_679268 |
|---|
| Protein GI | 110639059 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCCATAA ACTTATATAA TCTTTTGAAA CGAATAACAA CTTTTTTTCT GGCATTAGCC
GCATGCATTT CTGTACTGGA ACTGCATGCT CAAATTCATG CTGAGTTTTC TGTTGATGCG
ACTAAAGGTT GTATTCCTTT TACGGTAAAC ATTACAGATT TATCCGGTTC AACGTCTGCA
ACACCGTTTT ATAATTACGA TTACCTGGGT GGTACGCAGG GCGGCTTTAC CACATCTAAA
GTACATACCT ACACTACGCC AGGCACATAC CGCATCCACC AGTTCATCAC TACTGATATT
CCTGCAAATT CATACGATGT CGACATAGTC GTGGTTGCTT CCCCCACTCC TGTCATTACA
TTGAAATCGT GTGCAGGAAA CATAGTTGAC GTTACCGTTG ATGCCGTGTA TGATCAATAT
CTGATTGATT TTAACGATGG TTCAGCAAAA CAAACAGCAG CGCCCGGTTC AACTACCAGT
TATATGTATG GTTCCGAAGG AATGAAATCG GTTACGGTAA CCGGTTCATT CAATCCCAAT
ACCACTACCT GCGGCAGTAA GACTTCTACC GTTTATGCTC TTACCGCAGT TGTTAAGCCA
GACATCATTG ATTTAAGGAT GCTGAAGCAA CACACCAGTG CAGGCTCCAT CAGATTAAAT
TTTAATGCCT TGCAAGGGCA AAACTATCGC ATTGAACAAT GTGTAACCGG AGGAACGTTC
CTCCCTGTAT CAACATTTAC GGCAGGTGCT TCGGGAATAC AAACGTATAC AGACATCAAC
CTCAATACGC AGGCAAATGA TTATCAATAC CGCATTGTAG CATTTAATGA TTGCGGAACA
GAAATACCTT CTGACATAAT TTATTCTGTA GGTATTGACG CTACACCTGC TAATATGGTA
AATAACATAT TCTGGAACAA CGACGGGCCG GTTAATTCCT TTGATGTATA CCGTAACGGA
GTAGTGCTTG TTCATTTACC CGGAGCAAGC ACAGGTTATC CAGACAATGC CGTCATTTGC
GGTTTTTCTT ACACGTATCA GACAACAGCA ACATACACTA CTACTACATT ATCAGGTGTT
CCGCATAAAT CCTATTCAAT CGATACAACC ATTATCGCAA CATCTACCGT AATTCCTCCA
ACGCTTACAG ATGTAAATTC AACGATGAAC GGCAATACAG CTACCATATC GTGGACAAAT
GCTGTTGGCA TTTCAAGCTA CAATCTGTAT GTTTCACAAA ACGGCGGTGC TTATTCGTTA
GCAGCAAAAC CAGGCAGCAG CCCTTATTCC TATTCAGTTC CGAACACGTC AGATAGATAT
TGTTTCCAAT TAACATACAG CGACAACTGC AACAATACAT CCCTTCCATC CAATTTAACC
TGTCCCGTTA CATTACAGGG TGTACAAACA GGTTCCAATA TCATACTCAG CTGGACCCCT
TATAGCGGAT ACAACTCAGG TGCAGTATCC TATACGGTAC AAAAAATTGA TGAAGCCGGG
AATGTGCTTA CAGAAATCCC TGCTACAGGT ACTACGTATA CAGAAACAGT AACTCTTACT
GAGCCCTATT TAAATTATAG AATCAAGGTA ACGACCGCAA ACCCTGCGTT TACGACAGGT
TTTTCCAATA ACAGCTTGTT TAAATTTGAA GCACAGGTTT TTGTTCCCGA TATTTTCACA
CCAAACGGTG ATGGCGTAAA CGATCATTTT ATTGTTAAAT CTAAATATGT AAGCACGTAT
AACATTACTA TTTATACCCG CTGGGGCGAA GTGGTGTATG TAAGTTCAGA CATTAACGCC
GGTTGGAATG GTATGAATAA TACAGAGTAT GCACAAGACG GTGCTTACAC CTATAAAATA
ATCGGCACAG ATATTCACAA CAACGAATTT ATCCACACAG GAACACTAAC ATTAGCACGA
TAA
|
|---|
| Protein sequence | MSINLYNLLK RITTFFLALA ACISVLELHA QIHAEFSVDA TKGCIPFTVN ITDLSGSTSA
TPFYNYDYLG GTQGGFTTSK VHTYTTPGTY RIHQFITTDI PANSYDVDIV VVASPTPVIT
LKSCAGNIVD VTVDAVYDQY LIDFNDGSAK QTAAPGSTTS YMYGSEGMKS VTVTGSFNPN
TTTCGSKTST VYALTAVVKP DIIDLRMLKQ HTSAGSIRLN FNALQGQNYR IEQCVTGGTF
LPVSTFTAGA SGIQTYTDIN LNTQANDYQY RIVAFNDCGT EIPSDIIYSV GIDATPANMV
NNIFWNNDGP VNSFDVYRNG VVLVHLPGAS TGYPDNAVIC GFSYTYQTTA TYTTTTLSGV
PHKSYSIDTT IIATSTVIPP TLTDVNSTMN GNTATISWTN AVGISSYNLY VSQNGGAYSL
AAKPGSSPYS YSVPNTSDRY CFQLTYSDNC NNTSLPSNLT CPVTLQGVQT GSNIILSWTP
YSGYNSGAVS YTVQKIDEAG NVLTEIPATG TTYTETVTLT EPYLNYRIKV TTANPAFTTG
FSNNSLFKFE AQVFVPDIFT PNGDGVNDHF IVKSKYVSTY NITIYTRWGE VVYVSSDINA
GWNGMNNTEY AQDGAYTYKI IGTDIHNNEF IHTGTLTLAR
|
|---|
| |