| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2673 |
|---|
| Symbol | hisS |
|---|
| ID | 4186737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 3055958 |
|---|
| End bp | 3057319 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638072665 |
|---|
| Product | histidyl-tRNA synthetase |
|---|
| Protein accession | YP_679267 |
|---|
| Protein GI | 110639058 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0124] Histidyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAC CTTCATTACC GAAAGGAACA AGGGATTTTG GCCCTGCTCA AATGTTAAAG
AGGCAGTATT TACTGCAAAC AATACGCGAA ATATTTACCA AATATGGCTT TTTACCTATT
GAAACGCCTG CCATGGAAAA TTTAAGTGTG TTAACAGGTA AATATGGCGA TGAAGGCGAT
CAGTTAATTT ATAAAATATT GAATTCCGGC GATTTTATTC AGGGCGTTGA GCAAAATCAT
CTGCAGGAAG GATATAAAAA ATTAATTCCG AAAATATCAA AAAAGGCGCT TCGGTACGAT
TTAACAGTGC CATTTGCCCG GCACGTTGTC ATGAACCGCA ACGATATCAC CTTCCCGTTT
AAACGCTACC AGATTCAGCC CGTATGGCGA GCAGACCGTC CGCAGAAGGG CCGTTACTGC
GAATTCATGC AATGTGATGC AGACGTAGTT GGTACCGATT CGCTGTTATG TGAAGCCGAA
ATTGTGCTGA TGATCCACGA AGCTTTTGCA GCCTTAGGTA TTACAGATTT TGTTGTTAAA
ATAAATAACC GTAAAATCCT TTCCGGTATT GCAGATGCTA TCGGAAAAGA AGGCAGTGAA
GCTGAATTGT GTGTAGCCAT TGACAAACTG GATAAAATCG GTAAAGAAGC CGTTTTAGAA
GAATTAAAAA CAAAAGGTTT TACAGATAGT CAATTAACCA GACTTCTTCC TGTTTTTGAC
CTGAAAGGCA ATAATGCAGA GATTTTCCCA TTGCTTCGTA CTATTTTGGC ACAAAGCAGC
GTTGGATTAA AAGGGATCGA TGAATTAGAA AAAGTATTTA CCCTGATCGA AAAATCAGGA
CTGGGCAATG CTTCCATTGA AACAGATCTT ACCTTAGCCC GCGGACTTTC TTATTATACA
GGAGCGATCT TTGAAGTAAA AATCCTGAAT GTGCAGATGG GTAGCGTTTG CGGCGGCGGT
CGTTACGACA ACTTAACAGG CGTATTCGGT CTGCCGAATG TATCCGGTGT CGGTATTTCT
TTTGGTATAG ACCGTATTTA CGATGTAATG AATGAATTGA ATCTGTTTCC TTCACAGGAA
TCCAATTCTA CCCGTTTATT GATCTGCGCC TTTGATGAAA ACACGTTCAT GCATGCCTTG
CCAATGGTTA CAAAACTACG TGCACAAGGT ATTAATACAG AGCTGTACCC CGATCCGGTT
AAGATCAAAA AACAATTAAG TTACGCAGAC GATAAAAAAA TTCCGTTTGC TTTATTGATC
GGTGAAGATG AAATGAATCA GGGTTTATAT TCCCTGAAAA ATTTAATTAG CGGAGAACAG
TTTAAAGTAA CGTTTGACGA AGTTGTCCAT AAACTTATAT AA
|
|---|
| Protein sequence | MEKPSLPKGT RDFGPAQMLK RQYLLQTIRE IFTKYGFLPI ETPAMENLSV LTGKYGDEGD
QLIYKILNSG DFIQGVEQNH LQEGYKKLIP KISKKALRYD LTVPFARHVV MNRNDITFPF
KRYQIQPVWR ADRPQKGRYC EFMQCDADVV GTDSLLCEAE IVLMIHEAFA ALGITDFVVK
INNRKILSGI ADAIGKEGSE AELCVAIDKL DKIGKEAVLE ELKTKGFTDS QLTRLLPVFD
LKGNNAEIFP LLRTILAQSS VGLKGIDELE KVFTLIEKSG LGNASIETDL TLARGLSYYT
GAIFEVKILN VQMGSVCGGG RYDNLTGVFG LPNVSGVGIS FGIDRIYDVM NELNLFPSQE
SNSTRLLICA FDENTFMHAL PMVTKLRAQG INTELYPDPV KIKKQLSYAD DKKIPFALLI
GEDEMNQGLY SLKNLISGEQ FKVTFDEVVH KLI
|
|---|
| |