Gene CHU_2661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2661 
Symbol 
ID4185880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3044802 
End bp3045464 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content42% 
IMG OID638072653 
Producthypothetical protein 
Protein accessionYP_679255 
Protein GI110639046 
COG category[R] General function prediction only 
COG ID[COG0325] Predicted enzyme with a TIM-barrel fold 
TIGRFAM ID[TIGR00044] pyridoxal phosphate enzyme, YggS family 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAT CTGCACTACA TGATATCCGT ACATTTCTGA CGCCCTATAA CACGACGTTG 
ATAGCGGTTA CAAAAACACA TCCGGTTGAA GTACTGCAGC AAGCATATAG CAGCGGACTA
CGGATATTTG GAGAAAATAA AGTCCAGGAA CTCATTTCTA AAGCAGAAGT ACTGCCTAAA
GACATACAAT GGCATCTGAT CGGGCACCTG CAAAGCAATA AGGTAAAATA CATTGCGCCC
TTCATTTATA TGATCCACTC CGTTGACAGT TTTAAACTGC TGCAGGAAAT CAATAAAGAA
GCGAAAAAAA ACAAGCGCGT CATTGCCTGC CTGCTGCAGG TATATATCGC AAATGAAGAT
ACAAAGTTTG GCCTAGATAC ACAGGAACTG ACCAACCTGC TGCTGCACCC GGAACTGGAA
CAACTGGAAA ACATTCAAAT ACAGGGATTG ATGGGAATGG CTACCAATAC CAATGATCAG
GAGCAAGTCA GAAAGGAATT CCGGTATCTG AAAAATTTGT TTAAATCGCT TGCTGAAACC
ATCGAAAAAA AGAATGTTGC CTGGAAAGAA ATTTCTATGG GCATGACCTC TGATTACAGA
CTTGCCGTTG AAGAAGGCAG TACCATGGTT CGGATCGGAA GTGCGATCTT TGGAAACAGG
TAG
 
Protein sequence
MNKSALHDIR TFLTPYNTTL IAVTKTHPVE VLQQAYSSGL RIFGENKVQE LISKAEVLPK 
DIQWHLIGHL QSNKVKYIAP FIYMIHSVDS FKLLQEINKE AKKNKRVIAC LLQVYIANED
TKFGLDTQEL TNLLLHPELE QLENIQIQGL MGMATNTNDQ EQVRKEFRYL KNLFKSLAET
IEKKNVAWKE ISMGMTSDYR LAVEEGSTMV RIGSAIFGNR