| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2649 |
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| Symbol | rpoE |
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| ID | 4184771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 3031663 |
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| End bp | 3032253 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638072641 |
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| Product | RNA polymerase, sigma-E factor; heat shock and oxidative stress |
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| Protein accession | YP_679243 |
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| Protein GI | 110639034 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.557779 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGACCTTGG AATCTAAATA CCATAAAAAA CCTGAAGAAA TTGAGGAAGA ACAGCTTTGG
ATTGAAAAAG CCAAGCAAAA TCCTCAGCAC TTTGCTGTCC TGTATGAGAA ATATTATAAA
ACAATATTCC TGTACCTGTT CAGAAAAGTG AATGATATGG ATGTTGCAGG AGATCTCTGC
TCAGACGTAT TTTCCAAAGC CTTATCCGCT ATCCAATCCT ACGAATATAA AGGCGTGCCG
TATTCAGCCT GGCTCTACCG AATAGCAGCC AATGAAGCAA ACATGTATTT CAGGAAACAC
AATAAAAGAG AAATGATCTG CATCGACGAT ACCAGCATTC ATCTGCTGAA CGAAGATCTG
CAGGAGTCAA ATGAGGAAAA TATCTATCTC ACCTTTCTGC CCTTATGCCT GGAAAGGCTC
AAACCCGATG AAGTAATATT AGTACAATGG CGTTTCTTTG AAAACAAAGC ATTTAAAGAG
GTCGGTGAAA TTATGAATAT GACCGAAAAC AATGCTAAAG TAAAAACGTA CCGCATTCTG
GAAAAAATCA GGAAATGGAT GCTTGAAATG AAAGGAAAAA GTAATGAGTA A
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| Protein sequence | MTLESKYHKK PEEIEEEQLW IEKAKQNPQH FAVLYEKYYK TIFLYLFRKV NDMDVAGDLC
SDVFSKALSA IQSYEYKGVP YSAWLYRIAA NEANMYFRKH NKREMICIDD TSIHLLNEDL
QESNEENIYL TFLPLCLERL KPDEVILVQW RFFENKAFKE VGEIMNMTEN NAKVKTYRIL
EKIRKWMLEM KGKSNE
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