| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2647 |
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| Symbol | |
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| ID | 4184769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 3027598 |
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| End bp | 3028935 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638072639 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_679241 |
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| Protein GI | 110639032 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.910769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA CAGTACGCTA TTTATTTATA TGTTTATGCG CAGCGTTGCA GCTTTCAGCT
GCCGCACAGA CAGATTCAAG CATGCAGCTT AGCTTAAAGA AAGCGATAGA GATTGGCTTG
AATCAACGTT TCGATATTAA AAATCAGGAG CTGGCCATTC AGATCAGTGA AAGCAACCGG
CTAAAAACAC AAAGTAAAAA CCTTCCGCAG GTGAACGCGA GTATTGATTT CAGATACAAT
GCCGTATTGG CGACAAGCCT GCTGCCGCCG GGTGCTATCA ACAACAGCAC TGAATATACC
CCGATCAAAT TTGGCACGCC TTACAATACG CTTACGTCTA TTACCGCCAC ACAAAACCTG
TTTAATGCAG GCGTATCCGG CGATAAACTT GTAAACGATG CACAAAAAGA ATACGATCAG
GTAAGTCTTG AAAAATATAA AACAGATGCC AAATCTGCTA TCACACAAGC ATACTATCAG
GTACTGTTGA ATCAGGAACA GATTAAACTT ACTACAGAAA ACGTAGCCAA TGCAGAAACG
ATTGTTAAAA AAGGTGAAAG CGAATATTCA AACGGTACGT TGTTGAAAAC AGATCTTTCC
CGTTATCAAC TGGACTTATC TAATGCAAAA AATCAATTGC AGACAGCAAC AACCAATTAT
GAAAACAGCC TCTTGTTACT TAAGACACAA CTGATCTTAC CGATAGAAAC ACCCGTTCAG
TTAACAGACA ACCTGGAAGG TTTGATTACC AATTCAGACC AACTGGCAAA CAACAATGTA
ACTATTGAAC AGCGCTACGA GTACAGAATA GAATCAAGCA TGATGCGATT AAACGATATT
CAGGCAAAAA GATACAACCG TTCGTATTTA CCTTCTGCCT ATTTATATGG AAATGCTTCG
TTACAGAATC AGAATTCAAA AGTAACATTA TTTAACACCG ATACCTGGTA CCCCTATGTA
TATGTAGGTA TTCATGCGGA TATTCCAATC TTTGACGGTA TGGAAAAAAG CAGAAACATT
GCTGGGTATC GTTTACGCTC GATTCAAAAT AAAAACAATC TGGAAAAGCT TTCTTACGAA
ATTCAAACAG AAGCCATAAA CACACGTAAT CTGTTGAATA CAGCTTACAG CCAATACCAA
ACATCAAAAG AAAATTATGC ACTGGCACAA ACCATTATGA AAGTTGATCA GGACCGCTAT
AAAGAAGGGA CACTAACCGC GGCTGCGTTA AAAAATACCG AATACTCGTT ACAGAATGCA
CAGAACAATT ATTTAACCAG CATTTATAAT GTGCTGATCG CACAGGTGAA TTATAAAAAA
GCAATGGGAG AACTGTAA
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| Protein sequence | MKNTVRYLFI CLCAALQLSA AAQTDSSMQL SLKKAIEIGL NQRFDIKNQE LAIQISESNR
LKTQSKNLPQ VNASIDFRYN AVLATSLLPP GAINNSTEYT PIKFGTPYNT LTSITATQNL
FNAGVSGDKL VNDAQKEYDQ VSLEKYKTDA KSAITQAYYQ VLLNQEQIKL TTENVANAET
IVKKGESEYS NGTLLKTDLS RYQLDLSNAK NQLQTATTNY ENSLLLLKTQ LILPIETPVQ
LTDNLEGLIT NSDQLANNNV TIEQRYEYRI ESSMMRLNDI QAKRYNRSYL PSAYLYGNAS
LQNQNSKVTL FNTDTWYPYV YVGIHADIPI FDGMEKSRNI AGYRLRSIQN KNNLEKLSYE
IQTEAINTRN LLNTAYSQYQ TSKENYALAQ TIMKVDQDRY KEGTLTAAAL KNTEYSLQNA
QNNYLTSIYN VLIAQVNYKK AMGEL
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