Gene CHU_2627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2627 
SymbolprsA 
ID4185414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3007960 
End bp3008886 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content42% 
IMG OID638072618 
Productribose-phosphate pyrophosphokinase 
Protein accessionYP_679221 
Protein GI110639012 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0462] Phosphoribosylpyrophosphate synthetase 
TIGRFAM ID[TIGR01251] ribose-phosphate pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.98129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.818637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCCC TTAAATTATT TTCTGGAACT AACTCCCACT ACCTGGCAGA GAAAATTGCT 
GCAGCGTATG GAGAGCCACT AGGCCATAGA ACAATAAAAC GTTTCAGCGA CGGTGAGATC
TATGTTAGTT TTGATGAATC TGTTCGTGGA AAAGATGTGT ATATTATCCA GTCTACTTTC
CCGAATGCAG ATAATTTAAT GGAATTGATG TTAATGGTTG ATGCGGCACG CAGAGCATCT
GCAGCAGAAG TAGCAGCCAT TATTCCGTAT TTCGGTTATG CGCGCCAGGA TCGCAAAGAC
AAGCCAAGAG TACCGATTGC AGCTAAATTA GTTGCGAATC TGCTTTCAGC TGCTGGTGTT
GACCGTTTAA TGACATGCGA TTTACACGCA GGCCAGATCC AGGGCTTTTT CGATTTTCCG
GTAGATCACC TGGACGGCGC GGCAATCTTT ATTCCTTACT TAAGAAGCAT TCAATCCGAT
AAATTAATCA TCGCTTCACC GGATGTTGGT GGTGTGAAAC GTGCGCGTGA ATTTGCAAAG
CATTTAAAAG CTGAATTCGT AGTGTGTGAC AAACACCGTG AACGTGCCAA TGAAATTGCT
TCGATGCAAT TGATTGGTAA TGTTGAAGGT GCCGATGTGA TTTTAGTTGA TGATTTGATT
GATACAGGCG GTACCATTAC ACGTGCTGCT GAAGTAATCA TGAATAAAGG TGCGAAGAGT
GTACGTGCAA TCTGTACGCA CCCGATCTTA TCTGGTTCAG CATACGAAAA CATTGAAAAT
TCCGTGTTAA CAGAAATGTT GGTTACAGAT ACAATCCCGC TTCGCAAAGA AACATCAAAA
ATTAAAGTTC TTACCGTTGC TGATTTATTT GCTAAAGCAA TTTATCAGAT CCAGCAGAAC
GAATCCGTTA GTTCATTATT TCTTTAA
 
Protein sequence
MSSLKLFSGT NSHYLAEKIA AAYGEPLGHR TIKRFSDGEI YVSFDESVRG KDVYIIQSTF 
PNADNLMELM LMVDAARRAS AAEVAAIIPY FGYARQDRKD KPRVPIAAKL VANLLSAAGV
DRLMTCDLHA GQIQGFFDFP VDHLDGAAIF IPYLRSIQSD KLIIASPDVG GVKRAREFAK
HLKAEFVVCD KHRERANEIA SMQLIGNVEG ADVILVDDLI DTGGTITRAA EVIMNKGAKS
VRAICTHPIL SGSAYENIEN SVLTEMLVTD TIPLRKETSK IKVLTVADLF AKAIYQIQQN
ESVSSLFL