Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2627 |
Symbol | prsA |
ID | 4185414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3007960 |
End bp | 3008886 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638072618 |
Product | ribose-phosphate pyrophosphokinase |
Protein accession | YP_679221 |
Protein GI | 110639012 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.98129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.818637 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCATCCC TTAAATTATT TTCTGGAACT AACTCCCACT ACCTGGCAGA GAAAATTGCT GCAGCGTATG GAGAGCCACT AGGCCATAGA ACAATAAAAC GTTTCAGCGA CGGTGAGATC TATGTTAGTT TTGATGAATC TGTTCGTGGA AAAGATGTGT ATATTATCCA GTCTACTTTC CCGAATGCAG ATAATTTAAT GGAATTGATG TTAATGGTTG ATGCGGCACG CAGAGCATCT GCAGCAGAAG TAGCAGCCAT TATTCCGTAT TTCGGTTATG CGCGCCAGGA TCGCAAAGAC AAGCCAAGAG TACCGATTGC AGCTAAATTA GTTGCGAATC TGCTTTCAGC TGCTGGTGTT GACCGTTTAA TGACATGCGA TTTACACGCA GGCCAGATCC AGGGCTTTTT CGATTTTCCG GTAGATCACC TGGACGGCGC GGCAATCTTT ATTCCTTACT TAAGAAGCAT TCAATCCGAT AAATTAATCA TCGCTTCACC GGATGTTGGT GGTGTGAAAC GTGCGCGTGA ATTTGCAAAG CATTTAAAAG CTGAATTCGT AGTGTGTGAC AAACACCGTG AACGTGCCAA TGAAATTGCT TCGATGCAAT TGATTGGTAA TGTTGAAGGT GCCGATGTGA TTTTAGTTGA TGATTTGATT GATACAGGCG GTACCATTAC ACGTGCTGCT GAAGTAATCA TGAATAAAGG TGCGAAGAGT GTACGTGCAA TCTGTACGCA CCCGATCTTA TCTGGTTCAG CATACGAAAA CATTGAAAAT TCCGTGTTAA CAGAAATGTT GGTTACAGAT ACAATCCCGC TTCGCAAAGA AACATCAAAA ATTAAAGTTC TTACCGTTGC TGATTTATTT GCTAAAGCAA TTTATCAGAT CCAGCAGAAC GAATCCGTTA GTTCATTATT TCTTTAA
|
Protein sequence | MSSLKLFSGT NSHYLAEKIA AAYGEPLGHR TIKRFSDGEI YVSFDESVRG KDVYIIQSTF PNADNLMELM LMVDAARRAS AAEVAAIIPY FGYARQDRKD KPRVPIAAKL VANLLSAAGV DRLMTCDLHA GQIQGFFDFP VDHLDGAAIF IPYLRSIQSD KLIIASPDVG GVKRAREFAK HLKAEFVVCD KHRERANEIA SMQLIGNVEG ADVILVDDLI DTGGTITRAA EVIMNKGAKS VRAICTHPIL SGSAYENIEN SVLTEMLVTD TIPLRKETSK IKVLTVADLF AKAIYQIQQN ESVSSLFL
|
| |