| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2626 |
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| Symbol | rplY |
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| ID | 4185413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3007360 |
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| End bp | 3007938 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638072617 |
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| Product | 50S ribosomal protein L25/general stress protein Ctc |
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| Protein accession | YP_679220 |
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| Protein GI | 110639011 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.153335 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACAAG TAGAGATTAT AGGGTATAGC AGAGCAAATC TCGGTAAAAA AGGATCAAAA
GACCTTCGTC TTGATTCAAA CGTACCATGT GTGCTTTATG GTGGCGAATC ACAATTACAT
TTCCACGTAC CAATGTTTTT GTTCCGCGAT ATTATTTACA CAGGCGTAGC TTGTACCGTA
TTGTTGAATT TAGAAGGTAA ACAATATAAA TGTGTTGTTC AGGAAGTTCA ATTCCACCCG
ATCAATGAAA TGTTGCTTCA CGTAGATTTC TTATTACTTG ATGATAAGAA ACAAGTGAAA
ATGAATATCC CGGTTAAATT TGAAGGAACT TCTCCAGGTG TTATCAAAGG GGGGAAACTG
GTTCAGAAAG TAGCTACGTT ACAAGTAAAA GCGTTCCCTA AAGATCTTCC GGATGTTATC
CTTGCTGATA TTTCTCAGTT AGAATTAGCT AAATCTGTAA AAGTTGGTGA TATCAAAACA
AACAACTACA CAATTTTAAA TGCTAAGTCT ATTCCTGTTT GCACGGTTAC GATTCCAAGA
TCGTTGAAAC AAGAAGAAGC AGCAGCTGCT AAAAAGTAA
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| Protein sequence | MKQVEIIGYS RANLGKKGSK DLRLDSNVPC VLYGGESQLH FHVPMFLFRD IIYTGVACTV
LLNLEGKQYK CVVQEVQFHP INEMLLHVDF LLLDDKKQVK MNIPVKFEGT SPGVIKGGKL
VQKVATLQVK AFPKDLPDVI LADISQLELA KSVKVGDIKT NNYTILNAKS IPVCTVTIPR
SLKQEEAAAA KK
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