Gene CHU_2624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2624 
SymbolmurI 
ID4185411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3005734 
End bp3006543 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content43% 
IMG OID638072615 
Productglutamate racemase 
Protein accessionYP_679218 
Protein GI110639009 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.155868 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACG CACAAAGACC CATCGGTATA TTTGACAGCG GCATTGGCGG CTTAACTGTT 
GCGTATGCCG TGAATCAATT ATTACCCAAT GAAAGTATTA TATATTTTGG TGATACCGCG
CATTTTCCAT ACGGTGATAA ATCAACCGCT GCGATCCAAT CGTATGCGGT AAAAATTACC
GATATGCTGC TGCAGCAGCA TTGTAAAGTG ATTCTGATCG CCTGTAACTC CGCGTCATCG
GCGGCGTATC AGCTGGTGAA AGAATATGCA GGCAGCAGAG CAAAAGTAAT TAATGTTATT
GATCCGATTG TGCGGTATGT AGGTGCCAAA TATCCGAAAG GAAAAGTAGG ATTGATCGGT
ACGAAAAAAA CAGTAAGCTC AAATGTGTAT CAGCGTAAAA TTGATAAGCT GAATAAAGAG
ATTACACTCA AAGCACTCGC AACGCCGTTG CTGGCACCCA TGATCGAAGA AGGTTATTTT
AACAACGCCA TTTCCGAAAG CATCATTTTA AATTACCTGC AGGATAAGTC TCTGGACGGA
ATTGAGTCAC TGATCCTAGG TTGTACGCAT TATCCGTTGA TCAAAGAGCA GATCAATAAT
CTGTACAAAG GCAGTGTAGA CGTGATCGAC AGCTCGGATA TTGTGGCCGC AGCGGTGAAG
GATTATTTAG CGGATACTAA TTTATTGAAT ACCGATGCAG ACGTGCAGCA TAAATTTTAT
GTGTCGGATT ATACACAATC ATTTGCAGAA TCGACGCGCT TATTCTTCCG GCAGGAAGTG
CATCTGGAGC GTTATCCGCT GTGGGAGTAG
 
Protein sequence
MTDAQRPIGI FDSGIGGLTV AYAVNQLLPN ESIIYFGDTA HFPYGDKSTA AIQSYAVKIT 
DMLLQQHCKV ILIACNSASS AAYQLVKEYA GSRAKVINVI DPIVRYVGAK YPKGKVGLIG
TKKTVSSNVY QRKIDKLNKE ITLKALATPL LAPMIEEGYF NNAISESIIL NYLQDKSLDG
IESLILGCTH YPLIKEQINN LYKGSVDVID SSDIVAAAVK DYLADTNLLN TDADVQHKFY
VSDYTQSFAE STRLFFRQEV HLERYPLWE