Gene CHU_2620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2620 
SymbolhyfC 
ID4185407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3002665 
End bp3003762 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content43% 
IMG OID638072611 
ProductNADH:ubiquinone oxidoreductase chain H 
Protein accessionYP_679214 
Protein GI110639005 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.146447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGTAG TGCTATTTGT ATTGACGCTG ATTCTTCTAT ATGCCGTATT TGTGGTTTGG 
GCAGAACGGA AAGTTGCGGC ATTTATTCAG GATCGTCTGG GCCCGATGGA AGTTGGTCCG
TATGGCATGT TACAAACAAT TGCCGATCTG ATAAAACTGC TTCAGAAAGA AGACATCATC
GCAACAGGCG CAAACCGTTT TTTATTCCGT TTAGCTCCTG TATTAATTTT CACCGCCATC
TTTGCCGGTT TCGCAACACT TCCATTTGCA CCCGATCTGA TCGGTTCAAA AGCAGACGTT
GGCGTATTTT TCATGATCAC CATTGTTTCC TTAGACGTTG TAGGAATATT CTTAGCCGGT
TGGGCATCAA ACAATAAGTT CTCCATCCTT GGCGCGTTCC GTGCCATTGC CCAGGTAATC
TCTTACGAAA TTCCATTAAC CTTAAGTATT CTTGCCGTTG TATTGATTTG CCAGACGCTG
GACTTACAGG AAATCAGTTT TCAGCAGGGT ATTTATTTTG TAAACAAACA GGAATTGAAT
ACTTCCTTAT TTGGAATAAC ATCCCTGGGA ATTGATGTAA ACAAGATCGG CGGTTTTGTA
AGCTGGAATG CATTTAAGTA TCCGTTCCTG TTATTGGCCT ATGTCGTTTT CTTTATTGCA
TCATTAGCAG AATGCAACCG TGCACCCTTT GACATACCGG AAGGAGAATC AGAATTGGTA
TCCGGTTTTC ATACGGAGTA TACCGGTTTC CGTTTTGCCA TTTTATTCTT AGCAGAATAT
GCCATGATGT TACTCGTAGC ATTCTTAGGT GTGGTATTAT TCTTTGGTAG CTGGAACACC
GCCTTGCCAA ATATAGGCAG TTTACATTTC GCTGATTGGA CAAGCGGGAC ACCGGGCACT
ATAGCAGGTT ACGCCTGGGG ATTGTTCTGG CTGATCTCAA AAGGAATTAC GGTTGTATTC
CTGCAGTTGG TGATGCGCTG GACGTATCCG CGTCTGCGGG TAGATCAGTT AATGAATTTA
TGCTGGAAAA TATTATTGCC GCTGTCGCTG TTCTTAGTAA TCGTAAGCGG CGTGTGGGTA
GTATGGATGA AAATATAA
 
Protein sequence
MFVVLFVLTL ILLYAVFVVW AERKVAAFIQ DRLGPMEVGP YGMLQTIADL IKLLQKEDII 
ATGANRFLFR LAPVLIFTAI FAGFATLPFA PDLIGSKADV GVFFMITIVS LDVVGIFLAG
WASNNKFSIL GAFRAIAQVI SYEIPLTLSI LAVVLICQTL DLQEISFQQG IYFVNKQELN
TSLFGITSLG IDVNKIGGFV SWNAFKYPFL LLAYVVFFIA SLAECNRAPF DIPEGESELV
SGFHTEYTGF RFAILFLAEY AMMLLVAFLG VVLFFGSWNT ALPNIGSLHF ADWTSGTPGT
IAGYAWGLFW LISKGITVVF LQLVMRWTYP RLRVDQLMNL CWKILLPLSL FLVIVSGVWV
VWMKI