| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2606 |
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| Symbol | ompA |
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| ID | 4186150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2985361 |
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| End bp | 2987493 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638072598 |
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| Product | outer membrane peptidoglycan-associated protein |
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| Protein accession | YP_679201 |
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| Protein GI | 110638992 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATATC TAGCTTTTAG TATTGTTTTT ATTCTAACAG CATTTACCCG CGTTACCGCT
CAGAATTTAG ATGGAATTGA TAAAAGTCTG AGTTTATCTA AAATGAAGAC AAGGGCCCGC
ATTGCTGAAG AAACAGGTGA TATTTATACA GCACTTTTTT ATTATGAAGA AGTTGTACGC
AACGATTCAT CCGATCTGAA AGCACTTTAC CAGGTTGCAG AAATGCAGCG CTTCACCAGA
AATTATAAAG CAGCTGAAGT TACCTACGGA AAAATTCATG AAATAGCGGC AGCAGACTAT
CCGTTAGCCC AGTACTATCA GGGATTGATG CAAAAAATGA CTGGCAGATA CGAAGATGCC
AAACAAACAT TTTCAGAATT CAGAAAAAAT TCTGCTGCCC TTGCAGATAA AACATTCAAG
GCTACACTTG CACGAGATAT TTCCGGATGC GACAGCGGAA TAACGTACAG AGATTTCCCT
CAAAATACGC AAATCAAAAA TGCCGGCAAA TCTGTAAACT TTCCGCATAC GGAGTTTTCA
CCTGTGATTC TGGACAGTAC AACACTTGCC TTTGGTTCTC TTAGAATTGA CTCTGTAATC
TATTATGATA CACGCGGCGA GCATTACGAA AAGCAGCCTG TGAGACAACT TTATGAAGCA
AAAAAAGTAA AAGGGCAATG GGTTGAAAAG GGTTTACTGG AAGCCATCAA TGACCCAGCA
ATGGACATGG GGAATTTTGT TTACTCCCCT ACTACAGACC GGTATTATTT TACAAAATGC
ACCAAAAACC ATCACGGAAA AGTAAGTTGT GCCATTTATT ATTCAGAAAG AGTATCCGGT
AAATGGTCGC ACCCCTCTAA GCTTCCTGAC CCGATCAATA TTGAAGGTTA TACAGCAACA
CAGCCTACCA TTGTAATTGA TACAACATCA AGCAGTGCTG CAACTACTAC GCCTAAAAAT
ATGCCGCCGC GTAAAACCGG CGGTAACAAG CCTGTACCAA AACCTGTAGT GAATACAATT
GAATACCTGT ATTTTGTTTC CGACAGGCCT AAAGGCAAAG GCGGACTTGA CATCTGGTAC
ACCTCGTATA ATGCAAGTAA AAAAACGTGG AATGAACCAA CAAACCTGGC CGTAGCAAAT
ACACCAGAAA CAGAATGTAC GCCTTTCTAC CACGTTCCTA CACAAACCTT ATATTTCAGT
TCAAACGGAT TGGTTAATGC CGGAGGGTTG GATATTTATA AACTGGAAAA AGATGGCCGC
CGGTTTGGCC GTCCGGAAAA CCTTTCTTTC CCGGTTAACT CACCACAGGA TGAACTAAGC
TTTGTACTGG CAGATAATGC AAAAACAGGA TTCTTTGTAT CTAACAGACC CGGCGGAACA
CCATTCTTCC ATGAGACCTG CTGCGATGAC ATCTTTTCAT TCGAAGTAAT TCCCCCTCCC
CCATTTGTGT GTACGCTTGA TCTGAGCGTG CTGGATGTTG CCGCAAAAAA TAACTGCGAT
GGAGAATTGC TTAACATCAA TCAGGTTAAT TTAAAAACAA AAGCTGCTGA AAAAGATACT
GTTCGTTTAT CCAGCTGCAA GTATACGGTT TCACTTGCAC AGCATGTGAA GTACACCTTC
TTTATCAATA AACCCGGCTA CGTAACAGAT ACCTTATCCT TTGAAACACG CGATATGTGT
GCAACACCAA CCATTACAAA ATCCCTTACA CTTGTTCCGG TTAGTGTAAG TATGAAAAAT
TCAGAGCCGG TTATTGAAAC ACCGGTTGAA GGAAAAGCAT TTGTATTAAA AGACATTCAA
TATGAAACAA ATCAGACAGA TCTGAATGAT GAAGCTAAAG CCGCTATCGA CAATATCTTG
ATCCCGTTCT TAAAAGAACA TCCCACGGAT AAAATTATTA TCAGTTCACA TACGGATGAT
GTAGGAAGTC ATAAATACAA TGAAAACCTA TCCGATCAGC GTGCATTAAA AGTGATGCAA
TACCTGATAC AGAAAGGGAT CAGCGCAAAA CAGATCCAGG CGAAAGGTTA CGGAGAAACA
AAACCGATTG CGTCAAATAT CAACCCGGAT GGTTCTGAAA ATGAAATAGG ACGAAGCATT
AACAGACGTA CTGAATTTTT GATCAGTAAA TAA
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| Protein sequence | MKYLAFSIVF ILTAFTRVTA QNLDGIDKSL SLSKMKTRAR IAEETGDIYT ALFYYEEVVR
NDSSDLKALY QVAEMQRFTR NYKAAEVTYG KIHEIAAADY PLAQYYQGLM QKMTGRYEDA
KQTFSEFRKN SAALADKTFK ATLARDISGC DSGITYRDFP QNTQIKNAGK SVNFPHTEFS
PVILDSTTLA FGSLRIDSVI YYDTRGEHYE KQPVRQLYEA KKVKGQWVEK GLLEAINDPA
MDMGNFVYSP TTDRYYFTKC TKNHHGKVSC AIYYSERVSG KWSHPSKLPD PINIEGYTAT
QPTIVIDTTS SSAATTTPKN MPPRKTGGNK PVPKPVVNTI EYLYFVSDRP KGKGGLDIWY
TSYNASKKTW NEPTNLAVAN TPETECTPFY HVPTQTLYFS SNGLVNAGGL DIYKLEKDGR
RFGRPENLSF PVNSPQDELS FVLADNAKTG FFVSNRPGGT PFFHETCCDD IFSFEVIPPP
PFVCTLDLSV LDVAAKNNCD GELLNINQVN LKTKAAEKDT VRLSSCKYTV SLAQHVKYTF
FINKPGYVTD TLSFETRDMC ATPTITKSLT LVPVSVSMKN SEPVIETPVE GKAFVLKDIQ
YETNQTDLND EAKAAIDNIL IPFLKEHPTD KIIISSHTDD VGSHKYNENL SDQRALKVMQ
YLIQKGISAK QIQAKGYGET KPIASNINPD GSENEIGRSI NRRTEFLISK
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