Gene CHU_2601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2601 
Symbol 
ID4186145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2975314 
End bp2976162 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content41% 
IMG OID638072593 
Producttransglutaminase-like enzymes, putative cysteine protease 
Protein accessionYP_679196 
Protein GI110638987 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTA AAATACACAG TGACATTACC TATCAGGTTA TGTCGCCAAC AACATTCATT 
TTTAACGTTC ATGCTTTACG CACGGAAAGC CAGCACATAC TGGACGAATC ATTGATCGTT
ACGCCACCAA TAGAAATAGA AGAGTTTTCG TATAATTCAG GCACAAGCCG GTTTGTGCGA
TTAAAGGCAA CTGAAAATAC GACATTCAGT ATGTCTTATA CTGCCACGGT TGATACACAA
TACAAGGTTA TTGATCAAAG ACAGGAACTG GAAACTGTTC CCGTGGTAGA TCTTGACGGA
GATATTATTC CATTTCTCTT TCCAAGCCGT TATTGTCAAT CAGACAAGCT TCAAAAACTG
GCGTACAAAG AATTCGGCAA AATCGAAAAT GTCTATTCAA AAGTACTTGC GATTACAGAC
TGGATCTATA ACAATGTTGA ATACATCAGC GGCAGTACAA ATTCACAAAC GTCGGCCTTT
GACACCATAA CAGAACGTGC AGGCGTGTGC CGCGATTTTG CACATTTAGG GATTGCTTTA
TGCAGAGCCT TATCTATTCC TGCACGTTAC TTTACTGGTT ATGCCTTTAA ATTAAATCCA
CCTGACTTTC ATGCATGCTT TGAAGCCTAT ATCGGAGGCA ACTGGATCAT CTTTGATGCT
ACACGATTGG TACCACTTAA CGGACTTGTA AAAATAGCTA CAGGACGTGA TGCTGCAGAT
GCTGCCGTGG CCAGCATCTT TGGAAATGCT TCCAGTACAA ATATGCATGT GGAATGCGCA
TCACTCGATA CAGATTTTAC ACCGTTCTGG TATGATAAAA ATTCATTAAA AGGTCTCTCT
TTCCAGTGA
 
Protein sequence
MKFKIHSDIT YQVMSPTTFI FNVHALRTES QHILDESLIV TPPIEIEEFS YNSGTSRFVR 
LKATENTTFS MSYTATVDTQ YKVIDQRQEL ETVPVVDLDG DIIPFLFPSR YCQSDKLQKL
AYKEFGKIEN VYSKVLAITD WIYNNVEYIS GSTNSQTSAF DTITERAGVC RDFAHLGIAL
CRALSIPARY FTGYAFKLNP PDFHACFEAY IGGNWIIFDA TRLVPLNGLV KIATGRDAAD
AAVASIFGNA SSTNMHVECA SLDTDFTPFW YDKNSLKGLS FQ