Gene CHU_2580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2580 
Symbol 
ID4185699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2957771 
End bp2958424 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content43% 
IMG OID638072572 
Producthypothetical protein 
Protein accessionYP_679175 
Protein GI110638966 
COG category[S] Function unknown 
COG ID[COG4330] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAATTCA AAGTACTTTA CTATATGAAA AACAGATTAT TTATTTTAGC CATTCTCTGC 
CTCCTGCTTG AAGCGGGACG TATGCTGTAT TCAGGCACAC TTGGCTACAT GTTCCTCATC
TGGAACCTGT TTCTGGCAGC TGTCCCCTAT CTGTTGTCCA CGCACATACA GGCCACAAAA
CCAACAGGCT TAAACCTGAT CGGAAAATGT TTTATCTGGT TGCTGTTCCT GCCGAATGCC
TTATACATCA TCACCGATCT GAAACATTTA CATGAACGCC CACCGGTACC GGAGTGGTTC
GACTGCCTGC TTTTATTCAG CTTCTCTACC CTGGCATTGC TACTTGGCCT GTTGTCTTTT
TATCAAATGA ATCAGGTACT GAAAAGATAT GCACCTGCTT TTGTTCAGCA CATCATACTG
ATCAGTATTT CGCTCTTAGC CGGCTTTGGT GTGTACTTAG GCAGGGAACA GCGCTGGAAC
AGCTGGGACA TCTTTACCAA TCCTTTTGAT TTATTTTCTG CATGTATTTC CTTAAGTACG
GAACCACACG TGTGGGCATT CAGTCTGTGC TATGGTTTTG CCTTTTTAAG TATGTACCAC
ATCATTTCAT CTTTGATCCA CTACCGTCAT GAAACACCCG GTCAATTGGT TTAA
 
Protein sequence
MQFKVLYYMK NRLFILAILC LLLEAGRMLY SGTLGYMFLI WNLFLAAVPY LLSTHIQATK 
PTGLNLIGKC FIWLLFLPNA LYIITDLKHL HERPPVPEWF DCLLLFSFST LALLLGLLSF
YQMNQVLKRY APAFVQHIIL ISISLLAGFG VYLGREQRWN SWDIFTNPFD LFSACISLST
EPHVWAFSLC YGFAFLSMYH IISSLIHYRH ETPGQLV