Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2580 |
Symbol | |
ID | 4185699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2957771 |
End bp | 2958424 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638072572 |
Product | hypothetical protein |
Protein accession | YP_679175 |
Protein GI | 110638966 |
COG category | [S] Function unknown |
COG ID | [COG4330] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAATTCA AAGTACTTTA CTATATGAAA AACAGATTAT TTATTTTAGC CATTCTCTGC CTCCTGCTTG AAGCGGGACG TATGCTGTAT TCAGGCACAC TTGGCTACAT GTTCCTCATC TGGAACCTGT TTCTGGCAGC TGTCCCCTAT CTGTTGTCCA CGCACATACA GGCCACAAAA CCAACAGGCT TAAACCTGAT CGGAAAATGT TTTATCTGGT TGCTGTTCCT GCCGAATGCC TTATACATCA TCACCGATCT GAAACATTTA CATGAACGCC CACCGGTACC GGAGTGGTTC GACTGCCTGC TTTTATTCAG CTTCTCTACC CTGGCATTGC TACTTGGCCT GTTGTCTTTT TATCAAATGA ATCAGGTACT GAAAAGATAT GCACCTGCTT TTGTTCAGCA CATCATACTG ATCAGTATTT CGCTCTTAGC CGGCTTTGGT GTGTACTTAG GCAGGGAACA GCGCTGGAAC AGCTGGGACA TCTTTACCAA TCCTTTTGAT TTATTTTCTG CATGTATTTC CTTAAGTACG GAACCACACG TGTGGGCATT CAGTCTGTGC TATGGTTTTG CCTTTTTAAG TATGTACCAC ATCATTTCAT CTTTGATCCA CTACCGTCAT GAAACACCCG GTCAATTGGT TTAA
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Protein sequence | MQFKVLYYMK NRLFILAILC LLLEAGRMLY SGTLGYMFLI WNLFLAAVPY LLSTHIQATK PTGLNLIGKC FIWLLFLPNA LYIITDLKHL HERPPVPEWF DCLLLFSFST LALLLGLLSF YQMNQVLKRY APAFVQHIIL ISISLLAGFG VYLGREQRWN SWDIFTNPFD LFSACISLST EPHVWAFSLC YGFAFLSMYH IISSLIHYRH ETPGQLV
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