Gene CHU_2576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2576 
SymbolcheA 
ID4185695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2954240 
End bp2955289 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content37% 
IMG OID638072568 
Producttwo-component sensor histidine kinase 
Protein accessionYP_679171 
Protein GI110638962 
COG category[T] Signal transduction mechanisms 
COG ID[COG3275] Putative regulator of cell autolysis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACTG AAAAAGATAT AAAACGCAGC TATATATTCA TCGGCACACA CGTAATTGTG 
TGGGTGGTTC TATTCAGTTT GCCGTATCTG CTTTCGGTAG GCGATGAATT TAATCTCATG
CGCAACTTAC GGCATTCCAC TATTCCGTTG GTATACTGTC TGATTATTTT TTATACCAAT
TATTTTATTC TGATTGACCG CTTTTGGTTT TCCCCGAACA AGTCGGTTTT TATATTATTG
AATATAATTA TGGTTGTGTT TTTTGTTTTT GTCAACTATG AGGTAAAAAA AGTATGCTGC
ACTTTGGGTG TGGTAAAACC CAATGCACCT CCGCTGCAGT TATATCTGTA TGTAGATATG
ATTTCACTTA TTATTCCGGT GTTGTTTTCG ATCGGATTAA AAACGTACGA ACGCTGGATG
GGATCAGAAG ATATACACAG GCAGGCAGCA AATGAAAAAC TGATATCTGA ATTACAGCAT
TTAAAATATC AGCTGCAGCC GCATTTCTTT TTTAATTCGC TGAATAATAT TTATTCGCTG
ATTGATCAGC ACCCGGAACA GGCGAAGGAA GTTGTCCATA GTTTAGGAAA GCTGATGCGA
TACTTGCTGT ATGATACCTC TGTTGAAATG ATTCCGCTAT CAAAGGAAAT TGATTTTATG
AAGCGGTATA TTGAATTGAT GCAATTGCGT ACTTCTACCA ATACCGCCAT TGAAGCGAAT
TTCAGTCCGC TTGAAAAAAA CATTGATGTA GCGCCGTTGT TATTTATTTC ATTGATTGAA
AATGCCTTCA AACACGGTGT ATCCGCTTCT CAAAAATCTA CCATGCGGTT TAATTTATCG
GTTAAAAATG ATACCATCGT TTTTACGACA GAAAATTTAT ATATACCTAA AGATGTGTCG
GATAAGAGCG GTTCGGGGAT CGGTTTGGAA AACATGGAAA AGCGATTGGC ATTATTATAT
CCCGATGCAC ATGAATTTAA ACGCGAAGTG ATTTATGGAA TCTATCATAC CACATTACGC
ATTCAATATT TGAAATACAC ACAATGCTAA
 
Protein sequence
MNTEKDIKRS YIFIGTHVIV WVVLFSLPYL LSVGDEFNLM RNLRHSTIPL VYCLIIFYTN 
YFILIDRFWF SPNKSVFILL NIIMVVFFVF VNYEVKKVCC TLGVVKPNAP PLQLYLYVDM
ISLIIPVLFS IGLKTYERWM GSEDIHRQAA NEKLISELQH LKYQLQPHFF FNSLNNIYSL
IDQHPEQAKE VVHSLGKLMR YLLYDTSVEM IPLSKEIDFM KRYIELMQLR TSTNTAIEAN
FSPLEKNIDV APLLFISLIE NAFKHGVSAS QKSTMRFNLS VKNDTIVFTT ENLYIPKDVS
DKSGSGIGLE NMEKRLALLY PDAHEFKREV IYGIYHTTLR IQYLKYTQC