Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2570 |
Symbol | rhlE |
ID | 4186638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2947913 |
End bp | 2949253 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638072562 |
Product | ATP-dependent RNA helicase |
Protein accession | YP_679165 |
Protein GI | 110638956 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.463423 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTATTTC AAGATTTAAA ACTGATAGAC CCCATTTTGA AAGCACTTTC AGAAGAAGGC TACACAACTC CCACTCCTAT TCAGTCTCAG GCTATTCCGT ATGTATTGCA AGGCAAAGAC TTATTAGGCT GTGCACAAAC AGGAACAGGC AAAACAGCTG CTTTTTCAAT TCCTATTTTA CAATTATTAA GTGTAAAGAA AAGTACGGAT CGTAAAAGAC CCATCCGAAG CCTTATTGTT ACACCAACGC GTGAACTTGC TATACAAATC GGCGAAAGCT TACAGGCATA CGGAAAATAT ACCGGATTAA CTTCTACCGT AATCTTTGGC GGTGTTAATC AAAGCCGTCA GGTTACAGCC CTGCAAAACG GTATTGATGT ATTGGTTGCC ACTCCGGGCC GTTTACTGGA TCTGATGAAC CAGGGTTTTA TTTCATTGCG CCACATTGAA ATATTTGTAC TCGATGAAGC CGACAGGATG CTGGACATGG GTTTTGTACA TGATGTAAGA CGCCTGCTGC TTGCTTTGCC TGCCAAACGT CAGTCGCTGT TCTTCTCTGC AACGATGCCT CCTGAAATTG TAAAACTTGC AGATAATATT TTAGTAAATC CGTCAAAAGT AGAAGTAACC CCGGTTTCAT CTACAGCCGA TACAATCAAA CAGTTCATGT ACTTTGTTGA CAGAGGAAAT AAAAACAATC TGTTGGTTGA AGTATTACAG GATCCCAAAA TAAAAACCTG CCTTGTTTTC ACACGTACCA AACACGTTGC AGATAAAGTT GTAAAAATGC TGGCGGAGCA TAAAATTAAA GCAGAAGCCA TCCACGGAAA TAAAAGTCAG AATGCACGCC AGAATGCATT GACTAACTTC AAAGCACAAA CAACACGGAT ATTGGTTGCT ACTGATATTG CAGCACGTGG TATTGACGTA GACAATTTAG AATTTGTGAT CAATTACGAA ATTCCGAATA TTCCGGAAAC GTATGTACAC CGCATTGGTC GTACAGGCAG AGCGGGTGCA AAAGGAACAG CTTTCTCTTT CTGCGATGCG GAAGAAAAAG CATATCTGAA AGATATTGAA AAACTGATTT CAAAAAAGAT TCCTGTTATT GATGAACATC CGTATCCATT GATGGACCAC AATCCGCCAA AGACACCACA AGGCCGCCAG CAGCGCCCTG CCTCATCATC ACGACCTAAG GCAGCCTCCG GAGCAAACAG CGGAAGTTCA CGTGCAGGAA ATGCCGGCGG AAGCCAGCGC AGCAGTGGTT CTTCTTCCCG CAGCGGAAGC AGTACAGGCA AAAAGAAATG GTATGGCAAA TCCGGATCGA ATACTAAATA A
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Protein sequence | MLFQDLKLID PILKALSEEG YTTPTPIQSQ AIPYVLQGKD LLGCAQTGTG KTAAFSIPIL QLLSVKKSTD RKRPIRSLIV TPTRELAIQI GESLQAYGKY TGLTSTVIFG GVNQSRQVTA LQNGIDVLVA TPGRLLDLMN QGFISLRHIE IFVLDEADRM LDMGFVHDVR RLLLALPAKR QSLFFSATMP PEIVKLADNI LVNPSKVEVT PVSSTADTIK QFMYFVDRGN KNNLLVEVLQ DPKIKTCLVF TRTKHVADKV VKMLAEHKIK AEAIHGNKSQ NARQNALTNF KAQTTRILVA TDIAARGIDV DNLEFVINYE IPNIPETYVH RIGRTGRAGA KGTAFSFCDA EEKAYLKDIE KLISKKIPVI DEHPYPLMDH NPPKTPQGRQ QRPASSSRPK AASGANSGSS RAGNAGGSQR SSGSSSRSGS STGKKKWYGK SGSNTK
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