Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2561 |
Symbol | spoOJ |
ID | 4186629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2941243 |
End bp | 2942163 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638072553 |
Product | chromosome partitioning protein |
Protein accession | YP_679156 |
Protein GI | 110638947 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0012978 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.245215 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAATA CGAACAATAT AAAGAGAAAT GCATTGGGCA GAGGTTTAGG TGCCTTGTTG AAAGATGCGG ATTCAGTAAA AAGCAAAAAC ACTACTGAAA CAACCGCTGC TGTAGCAAGC AACCTGAATG AAATCCCGGT TGAGCAGATC GAAGTAAATA GCTATCAGCC GCGTTCTCAT TTCAATGATG AAGCTCTGAA GGAATTATCG GAATCGATAA AGATCCAGGG TATCATTCAA CCGATCACTG TTCGTCAGTT AGCTCCTAAT CAATACCAGT TAATCTCCGG TGAACGCCGT TTACGTGCGT CTAAACTTGC AGGTTTAACA AACATTCCTG CCTACATCCG TACAGCAAAC GACCAGCAGA TGCTGGAGAT GGCACTGATC GAAAACATTC AGCGTGAAAA CCTGAATCCC ATTGAAATTG CGATCAGTTA TCAGCGCATG ATTACGGAAT GTAATTTAAA GCAGGAAGAA CTGGGCGACC GTGTTGGTAA GAACCGTTCA ACCGTTACCA ATTATGTACG TTTACTGAAA TTACCACCGG ATATACAGGT TGCCTTACGT GATAACGAAA TCAGTATGGG ACATGCACGT TCTATTATCA GTTTGGAAAA AATAGAACAG CAATTGTATG TGTTAAATAA AATCAAAAGC GAAGAATTAT CGGTGCGTGC CGTTGAAGAA CTGGTACGTA ACTTACAGAA TAATAAACCG GCTTCAGCAG ATACTAAGGG AACACCTGCA AAACCAGCAG CGGCTGCCAA TGCGGAGATT TCAAGCCTTC AGAACAAATT AACCTCTCAC TTCGGAACTA AAATACAGGT AAAGAGTGAT AAGCAATTTA AAGGCGAGAT CAAGATTCCG TTTGTTTCTG CAGAAGACCT GAACCGTATT TTAGAGATAT TAAACTTCTA A
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Protein sequence | MSNTNNIKRN ALGRGLGALL KDADSVKSKN TTETTAAVAS NLNEIPVEQI EVNSYQPRSH FNDEALKELS ESIKIQGIIQ PITVRQLAPN QYQLISGERR LRASKLAGLT NIPAYIRTAN DQQMLEMALI ENIQRENLNP IEIAISYQRM ITECNLKQEE LGDRVGKNRS TVTNYVRLLK LPPDIQVALR DNEISMGHAR SIISLEKIEQ QLYVLNKIKS EELSVRAVEE LVRNLQNNKP ASADTKGTPA KPAAAANAEI SSLQNKLTSH FGTKIQVKSD KQFKGEIKIP FVSAEDLNRI LEILNF
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