Gene CHU_2561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2561 
SymbolspoOJ 
ID4186629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2941243 
End bp2942163 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content41% 
IMG OID638072553 
Productchromosome partitioning protein 
Protein accessionYP_679156 
Protein GI110638947 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0012978 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.245215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATA CGAACAATAT AAAGAGAAAT GCATTGGGCA GAGGTTTAGG TGCCTTGTTG 
AAAGATGCGG ATTCAGTAAA AAGCAAAAAC ACTACTGAAA CAACCGCTGC TGTAGCAAGC
AACCTGAATG AAATCCCGGT TGAGCAGATC GAAGTAAATA GCTATCAGCC GCGTTCTCAT
TTCAATGATG AAGCTCTGAA GGAATTATCG GAATCGATAA AGATCCAGGG TATCATTCAA
CCGATCACTG TTCGTCAGTT AGCTCCTAAT CAATACCAGT TAATCTCCGG TGAACGCCGT
TTACGTGCGT CTAAACTTGC AGGTTTAACA AACATTCCTG CCTACATCCG TACAGCAAAC
GACCAGCAGA TGCTGGAGAT GGCACTGATC GAAAACATTC AGCGTGAAAA CCTGAATCCC
ATTGAAATTG CGATCAGTTA TCAGCGCATG ATTACGGAAT GTAATTTAAA GCAGGAAGAA
CTGGGCGACC GTGTTGGTAA GAACCGTTCA ACCGTTACCA ATTATGTACG TTTACTGAAA
TTACCACCGG ATATACAGGT TGCCTTACGT GATAACGAAA TCAGTATGGG ACATGCACGT
TCTATTATCA GTTTGGAAAA AATAGAACAG CAATTGTATG TGTTAAATAA AATCAAAAGC
GAAGAATTAT CGGTGCGTGC CGTTGAAGAA CTGGTACGTA ACTTACAGAA TAATAAACCG
GCTTCAGCAG ATACTAAGGG AACACCTGCA AAACCAGCAG CGGCTGCCAA TGCGGAGATT
TCAAGCCTTC AGAACAAATT AACCTCTCAC TTCGGAACTA AAATACAGGT AAAGAGTGAT
AAGCAATTTA AAGGCGAGAT CAAGATTCCG TTTGTTTCTG CAGAAGACCT GAACCGTATT
TTAGAGATAT TAAACTTCTA A
 
Protein sequence
MSNTNNIKRN ALGRGLGALL KDADSVKSKN TTETTAAVAS NLNEIPVEQI EVNSYQPRSH 
FNDEALKELS ESIKIQGIIQ PITVRQLAPN QYQLISGERR LRASKLAGLT NIPAYIRTAN
DQQMLEMALI ENIQRENLNP IEIAISYQRM ITECNLKQEE LGDRVGKNRS TVTNYVRLLK
LPPDIQVALR DNEISMGHAR SIISLEKIEQ QLYVLNKIKS EELSVRAVEE LVRNLQNNKP
ASADTKGTPA KPAAAANAEI SSLQNKLTSH FGTKIQVKSD KQFKGEIKIP FVSAEDLNRI
LEILNF