Gene CHU_2554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2554 
Symbol 
ID4186833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2935374 
End bp2935814 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content38% 
IMG OID638072546 
Producthypothetical protein 
Protein accessionYP_679149 
Protein GI110638940 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.142784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATAA AATTGATTGC TCAGGTAAAA ACAGTTATTA ATGCACCCAT TGAAAAAGTA 
TGGGAAGCAT TGGTTAATCC GGAAATCATT AAAGAATACA TGTTTGGTAC AACTGTGGTA
TCAGACTGGA AAGAAGGAAG TCAGATTGTG TGGAAAGGGG AATGGAAAGG AAAGGCATAT
GAAGACAAGG GAACAATACT TCAATTCAAC GAACGGAGTA TCTTACAGTA TTCGCATTTC
AGTCCGCTGA CCGGTAAACC CGACCTGCCG GAGAATTATC ATGTTGTTAC CATCACATTA
ACAGCATTGA AAAAAGGCGT TGAAGTGGAA TTGACTCAGG ATAATAATGA AACTGAAAAA
GAACAAAAGC ATTCAGAAGA TAATTGGAAT ACAATGCTGG AGGGATTAAA GAAATTTCTG
GAGAATAAAG TGTCCGCGTA A
 
Protein sequence
MEIKLIAQVK TVINAPIEKV WEALVNPEII KEYMFGTTVV SDWKEGSQIV WKGEWKGKAY 
EDKGTILQFN ERSILQYSHF SPLTGKPDLP ENYHVVTITL TALKKGVEVE LTQDNNETEK
EQKHSEDNWN TMLEGLKKFL ENKVSA