Gene CHU_2547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2547 
Symbol 
ID4186826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2928727 
End bp2929524 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content38% 
IMG OID638072539 
Productglycosylase or SAM-dependent methyltransferase 
Protein accessionYP_679142 
Protein GI110638933 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.999348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAG TTCTGGGATT AGCGAAAAGA ATTATTAAAT CAACAGTAGT TAAACTGCAG 
CAAATTTATT TTCAGATTTT TGGCAGTAAG GTTGAATGCA ATATTTGTCA CTACAAGGCA
AATAAATTAA ACAGTGACAG CTGGCATGCA TACTGCACCT GCCCGAATTG TTCATCCGGA
GTGCGTCAAC GGCTGCTGAT GGCTTCTTTT ACACTTCTTG ACAGATTCAA TTTTCACTCA
ATCATAGATA AGAAAAACGT ACTGCACTTC GCCCCTGAAA AAGCATTAGG TGCATTAATA
CAACAGCGTG CCAAAGAATA CCGGACAGCA GATTTTTTCG CCGAAGGATA TTCTTATAAA
AATATTGATT ACAACATCGA TATTTCGGAT ATGAAAACCA TACAAACAGA AACATTCGAT
TGTGTTATTG CCTGTGATGT GCTGGAACAT GTACCCGATC ATATTGGTGG TATCAGAGAA
GTTTACAGAA TACTAAAAAA TGAAGGCTAC TGCATATTTA CAGTACCCCA AAAAGATCAT
CTGCAGGTAA CCTTTGAAGA CCTTTCCATT ACAGATAAAA AAGAACGGGA AAGAATATTC
GGACAATACG ATCACCTGAG AATATACGGA GACGATTTTA CTACGATACT ACAAAACGCC
GGCTTTGAAG TTACCGCAGT GGATGAACAT TTTTTTGACA AACATGTTGC AGCGCATTAT
GTTTTGTTCC CGCCGGTTTT ATCACAGCAT CCGCTGGCAA CAAATTACAG AAAAATATTC
TTTGGAAGGA AAATATAA
 
Protein sequence
MRKVLGLAKR IIKSTVVKLQ QIYFQIFGSK VECNICHYKA NKLNSDSWHA YCTCPNCSSG 
VRQRLLMASF TLLDRFNFHS IIDKKNVLHF APEKALGALI QQRAKEYRTA DFFAEGYSYK
NIDYNIDISD MKTIQTETFD CVIACDVLEH VPDHIGGIRE VYRILKNEGY CIFTVPQKDH
LQVTFEDLSI TDKKERERIF GQYDHLRIYG DDFTTILQNA GFEVTAVDEH FFDKHVAAHY
VLFPPVLSQH PLATNYRKIF FGRKI