Gene CHU_2545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2545 
SymbolkptA 
ID4186824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2927546 
End bp2928133 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content37% 
IMG OID638072537 
ProductRNA 2'-phosphotransferase 
Protein accessionYP_679140 
Protein GI110638931 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1859] RNA:NAD 2'-phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTTTAT TATCAAAAGA ATTGATCTTT AGATACATGA TTACTGAAAA AGAACAAATA 
CGTATAAGTA AATTTTTAAG TCTTGTGTTA AGACATCAGC CGGAGTTAAT CGGTCTGCAA
TTAAATGAAC AAGGCTGGGC ACATATAGAA ACGCTGCTTG AAAAATCGGC TGCTTATGGC
GTTTCCTTTG ACAAGCAAAC ATTAAAGTAC CTTGTTGCGA CAAACTCAAA AAAACGCTTT
GCCTTCAGCC CCGATGCAGA ATACGTACGT GCAAGTCAGG GACATTCCGT AGATATTGAA
TTAGGGTACA AAAATCAAAA GCCGCCTGAA ATTTTATATC ATGGAACAGC AGAAAAATTT
ATGCAATCGA TTTTGGAAAC AGGTCTTGAA AAATGCCGCA GACAGCATGT ACATTTAAGC
AGCACTATTG AAACTGCCAT CCATGTTGGC CAGCGCCACG GAAAACCAGT TGTATTTACA
GTTCTTGCAC AACAGATGTA TGCTAACGAT TTCAGTTTTT ATCTTTCGGA TAATGGTGTC
TGGCTTACAG ATCATGTTCC TGTTATATAT TTAACTATTA ACCCGTGA
 
Protein sequence
MFLLSKELIF RYMITEKEQI RISKFLSLVL RHQPELIGLQ LNEQGWAHIE TLLEKSAAYG 
VSFDKQTLKY LVATNSKKRF AFSPDAEYVR ASQGHSVDIE LGYKNQKPPE ILYHGTAEKF
MQSILETGLE KCRRQHVHLS STIETAIHVG QRHGKPVVFT VLAQQMYAND FSFYLSDNGV
WLTDHVPVIY LTINP