Gene CHU_2512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2512 
SymbolcnhA 
ID4185652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2885450 
End bp2886322 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content46% 
IMG OID638072505 
Productcarbon-nitrogen hydrolase 
Protein accessionYP_679108 
Protein GI110638899 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID[TIGR03381] N-carbamoylputrescine amidase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATAAGA AAGTAAACGT TGGTTTGGTT CAATTGTCCT GCAGCAGCAA TGTTAAAGAC 
AATTTTGAAA AGAATGTACA AGGCATCCGT GAAGCAGCCG CGAAAGGTGC GCAGATCATT
TGCCTGCAGG AATTGTTCGG TTCACTCTAC TTTTGTGATG TAGAAGATTA CGACAATTTC
AAATTAGCAG AATCAATTCC CGGTCCGGCT ACGGATGCGT TTCAGGCGCT GGCGAAAGAA
CTGGGTGTAG TGATCATCGC TTCACTGTTT GAAAAACGTG CAGAAGGTCT GTATCATAAT
ACAACAGCAG TGATCGATGC GGACGGCAGT TATTTGGGTA AGTACCGCAA GATGCACATT
CCGGATGATC CGGGTTATTA TGAAAAATTC TATTTCACAC CTGGTGATCT TGGATATAAA
GTTTTCAAAA CAAAGTTTGC TACCGTAGGT GTGTTGATCT GCTGGGACCA GTGGTATCCG
GAAGCTGCAC GTATTACGTC TTTAATGGGT GCAGACATCC TCTTCTACCC GACCGCTATC
GGCTGGGCAG ACCACCAGAC AGAAGAAGTC AATACCGATC AGTACAATGC ATGGCAAACG
ATTCAGCGTT CGCACTCGGT TGCTAACGGC ACACCTGTTG TATCCGTTAA CAGAACCGGA
GTTGAAGCCG GCATGCAGTT TTGGGGCGGC TCCTTTGTAT CCAATGCGCA GGGCCGCGTA
CTATACCAGG CACCGCATTT AACAGAAGAG ATCCATGTAC AGGAAATTGA TATGTCTCAA
ACCGATTATT ACCGTACTCA CTGGCCTTTC CTGCGTGACA GACGCATTGA TTCGTATGCG
CCGATACAGA AAAGGTTTAT TGATGGCGAG TAA
 
Protein sequence
MNKKVNVGLV QLSCSSNVKD NFEKNVQGIR EAAAKGAQII CLQELFGSLY FCDVEDYDNF 
KLAESIPGPA TDAFQALAKE LGVVIIASLF EKRAEGLYHN TTAVIDADGS YLGKYRKMHI
PDDPGYYEKF YFTPGDLGYK VFKTKFATVG VLICWDQWYP EAARITSLMG ADILFYPTAI
GWADHQTEEV NTDQYNAWQT IQRSHSVANG TPVVSVNRTG VEAGMQFWGG SFVSNAQGRV
LYQAPHLTEE IHVQEIDMSQ TDYYRTHWPF LRDRRIDSYA PIQKRFIDGE