Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2512 |
Symbol | cnhA |
ID | 4185652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2885450 |
End bp | 2886322 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638072505 |
Product | carbon-nitrogen hydrolase |
Protein accession | YP_679108 |
Protein GI | 110638899 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | [TIGR03381] N-carbamoylputrescine amidase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATAAGA AAGTAAACGT TGGTTTGGTT CAATTGTCCT GCAGCAGCAA TGTTAAAGAC AATTTTGAAA AGAATGTACA AGGCATCCGT GAAGCAGCCG CGAAAGGTGC GCAGATCATT TGCCTGCAGG AATTGTTCGG TTCACTCTAC TTTTGTGATG TAGAAGATTA CGACAATTTC AAATTAGCAG AATCAATTCC CGGTCCGGCT ACGGATGCGT TTCAGGCGCT GGCGAAAGAA CTGGGTGTAG TGATCATCGC TTCACTGTTT GAAAAACGTG CAGAAGGTCT GTATCATAAT ACAACAGCAG TGATCGATGC GGACGGCAGT TATTTGGGTA AGTACCGCAA GATGCACATT CCGGATGATC CGGGTTATTA TGAAAAATTC TATTTCACAC CTGGTGATCT TGGATATAAA GTTTTCAAAA CAAAGTTTGC TACCGTAGGT GTGTTGATCT GCTGGGACCA GTGGTATCCG GAAGCTGCAC GTATTACGTC TTTAATGGGT GCAGACATCC TCTTCTACCC GACCGCTATC GGCTGGGCAG ACCACCAGAC AGAAGAAGTC AATACCGATC AGTACAATGC ATGGCAAACG ATTCAGCGTT CGCACTCGGT TGCTAACGGC ACACCTGTTG TATCCGTTAA CAGAACCGGA GTTGAAGCCG GCATGCAGTT TTGGGGCGGC TCCTTTGTAT CCAATGCGCA GGGCCGCGTA CTATACCAGG CACCGCATTT AACAGAAGAG ATCCATGTAC AGGAAATTGA TATGTCTCAA ACCGATTATT ACCGTACTCA CTGGCCTTTC CTGCGTGACA GACGCATTGA TTCGTATGCG CCGATACAGA AAAGGTTTAT TGATGGCGAG TAA
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Protein sequence | MNKKVNVGLV QLSCSSNVKD NFEKNVQGIR EAAAKGAQII CLQELFGSLY FCDVEDYDNF KLAESIPGPA TDAFQALAKE LGVVIIASLF EKRAEGLYHN TTAVIDADGS YLGKYRKMHI PDDPGYYEKF YFTPGDLGYK VFKTKFATVG VLICWDQWYP EAARITSLMG ADILFYPTAI GWADHQTEEV NTDQYNAWQT IQRSHSVANG TPVVSVNRTG VEAGMQFWGG SFVSNAQGRV LYQAPHLTEE IHVQEIDMSQ TDYYRTHWPF LRDRRIDSYA PIQKRFIDGE
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