Gene CHU_2508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2508 
Symbol 
ID4185648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2882484 
End bp2883386 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content40% 
IMG OID638072501 
Producthypothetical protein 
Protein accessionYP_679104 
Protein GI110638895 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5653] Protein involved in cellulose biosynthesis (CelD) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATCG AATCGAATCG GCTGGATACG GAAACAGCAC ATTTTTTATT CAACCAGAAT 
AGATATTTAC AGGCAAATAG TTTAACGGCT TTAACGTTTG CAGATAAGGC ATCCTCGCCG
ATGTGTTTCA TTAACATGAT TGAAGCATTG CCCAAAATGT ATATAAGCGG CTTGCGCGCA
CCCTTTGCCG GTATTGAATG TTCGGATACA AACGCGCTGG ATACATTGGT AAAAGAACTT
GTAGAAACTT ACCGCAAACG TGGCGACGGA GAAATATTCA TAAAACAAGC ACCGGTTTTT
TACCACACAG CAGTAGCTGC AGATATTGAT GCAGCCTTAC GCAGCAATGG ATTTAAACTT
TTGCATACAG ATGTTAATCA GTATTTACCT GTTGATGCAG CTAAATCATT TATAGGCAGC
ATTGATTACC AGAAACGCAG ATCGCTGCGG ATACTAAAAC AGAAAGGCGC GCAGGCAGTA
TTTTTTAATG CCATAGAATC AGATATCTGG TATGCGCTGT ACCTGAAATC ACGAAAGTAT
AAAAATTACC CTGTTACGAT TTCAAAAGAA CAATACGATT TACTCAGTAC AAAACTTCCC
GATGCTTATC GGTATGTAGG GGTATTTTTA GACGGTAAAC TTATTGCCAA TGCTGTGTGG
GTACAGGTTA CAAAAGATAT TGTATATTAT TTTCTGGCGG CTTCAGACCC GGATTATGAT
GTGTTTAGTC CGTCTATTAT GTTGATTGAG GCCCTATACG ACCGGGCCTG TGCCGAAGGT
ATTAAAATCA TTGATCTGGG TGTTTCTTCC ATTGAAGGCG TGTTAAACGA AGGCCTCCAT
TTTTTTAAAC GCAATGTCGG GGGGATTGAT TCTCAGAAAA ATACCTATGG GCTTTTATGT
TAA
 
Protein sequence
MIIESNRLDT ETAHFLFNQN RYLQANSLTA LTFADKASSP MCFINMIEAL PKMYISGLRA 
PFAGIECSDT NALDTLVKEL VETYRKRGDG EIFIKQAPVF YHTAVAADID AALRSNGFKL
LHTDVNQYLP VDAAKSFIGS IDYQKRRSLR ILKQKGAQAV FFNAIESDIW YALYLKSRKY
KNYPVTISKE QYDLLSTKLP DAYRYVGVFL DGKLIANAVW VQVTKDIVYY FLAASDPDYD
VFSPSIMLIE ALYDRACAEG IKIIDLGVSS IEGVLNEGLH FFKRNVGGID SQKNTYGLLC