Gene CHU_2507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2507 
SymbolwzxE 
ID4185647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2881158 
End bp2882423 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content38% 
IMG OID638072500 
Productmembrane protein 
Protein accessionYP_679103 
Protein GI110638894 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAA TCCGGAACAG CTTTTTTTCT TTAATCAGTA TCTTTTTAAA CGTAGCCTTT 
GGGTTTGTCT ACAATAAAAT CGTATCTGTT TATTTTGGTC CGATCGGTTT ATCCTTATTA
ACACACTATC AGAATTTAGT TGCCTTCTTC ATGCACATTC CGCAGGAAGG AATTCATAAA
GCGTTCATCA ATCAGCTGAC GCAGGAAGAG GACAGTAAAA AATATACAGG AAAAATTATT
GTTCATACGG TTGTATGGAA CGTTATTATA TTTTTAATGC AATGGGTGTG TCTGCTTGTA
TACATGTATT GGGCCGAATC GCCGCTGGAA GAATTATTCG TTGACTGGAA AGCTTCTTTG
CTGATCGGTG TTTCTTTTTT TCTTTTTGTA TTGAATTTAC TGGCATCTTC GTGGATGGTA
GCACGCCATA AGCTGAAACG CTATGCCGTT TATACTTTTT TATTGGGCAT TACATCGGTG
ATTGGTATGT TCTGTTGTGT ATACTTTAAT GTTTCACATT CTTTATACTG GATTATTTTA
GCCGTTACGT TATCGAACTT TCCGGTGTTC ATATACATGT GCCTTACCGT TTACAGAAAG
TTTCATTACT CCTGGAACGA TGTAAAAGAT CTGTTTGATG GTAAGGATTA TTTTATGCCG
CTTATCATCA TGGGGGCTGT ATCGCTCATT TCCGGCAAGT TGCTGGATTA TATTGTTCGT
GAAATTGCCT TTGATTTAAT CGGTCCGTAT GAAACCGGCT TGTGGCAATC GGCGGTGAAG
ATCTCACAAG CGTTTGTATT TTTATGTGGT GCATTTCTAT CAACCATCTT TTATCCGTAT
GCATCAGAGT GCATTAAAGA TAAATCAGCC TTACATAATT ATGTGAAAAA GTTTATGCTG
CTGTATGCTC CTGTTACATT GATTGGTGTA GCAGCGATGT TTATACTGAA AGGATTATTA
TTTCAGATTT TATTTTCAGA AGAATTCATA CAGGCAGATA AATACTTCTT ATTGATCCTG
ATCGGCGATT GGCTGCGTTG TTTGTCGTGG GTAGGCGGCT ATTTGCTGAT GGCTTCTTCC
GATACGCGTC GTTTTATTTT ATTTGAAATT ATTTCCGGTG TCGTATTTAT TCTTGTCTTT
ATTTTAGGAA CGGATTATTT TAGCTGGGAA GTAATGGCGG TGGCAAACCT GATCCGTTAC
ATCGTCTATT CAATACTGAT GCTTTTTTAT TATAAACGTG TATGGATGCT GAAAGAGAGC
CGCTAG
 
Protein sequence
MNQIRNSFFS LISIFLNVAF GFVYNKIVSV YFGPIGLSLL THYQNLVAFF MHIPQEGIHK 
AFINQLTQEE DSKKYTGKII VHTVVWNVII FLMQWVCLLV YMYWAESPLE ELFVDWKASL
LIGVSFFLFV LNLLASSWMV ARHKLKRYAV YTFLLGITSV IGMFCCVYFN VSHSLYWIIL
AVTLSNFPVF IYMCLTVYRK FHYSWNDVKD LFDGKDYFMP LIIMGAVSLI SGKLLDYIVR
EIAFDLIGPY ETGLWQSAVK ISQAFVFLCG AFLSTIFYPY ASECIKDKSA LHNYVKKFML
LYAPVTLIGV AAMFILKGLL FQILFSEEFI QADKYFLLIL IGDWLRCLSW VGGYLLMASS
DTRRFILFEI ISGVVFILVF ILGTDYFSWE VMAVANLIRY IVYSILMLFY YKRVWMLKES
R