Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2507 |
Symbol | wzxE |
ID | 4185647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2881158 |
End bp | 2882423 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638072500 |
Product | membrane protein |
Protein accession | YP_679103 |
Protein GI | 110638894 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAA TCCGGAACAG CTTTTTTTCT TTAATCAGTA TCTTTTTAAA CGTAGCCTTT GGGTTTGTCT ACAATAAAAT CGTATCTGTT TATTTTGGTC CGATCGGTTT ATCCTTATTA ACACACTATC AGAATTTAGT TGCCTTCTTC ATGCACATTC CGCAGGAAGG AATTCATAAA GCGTTCATCA ATCAGCTGAC GCAGGAAGAG GACAGTAAAA AATATACAGG AAAAATTATT GTTCATACGG TTGTATGGAA CGTTATTATA TTTTTAATGC AATGGGTGTG TCTGCTTGTA TACATGTATT GGGCCGAATC GCCGCTGGAA GAATTATTCG TTGACTGGAA AGCTTCTTTG CTGATCGGTG TTTCTTTTTT TCTTTTTGTA TTGAATTTAC TGGCATCTTC GTGGATGGTA GCACGCCATA AGCTGAAACG CTATGCCGTT TATACTTTTT TATTGGGCAT TACATCGGTG ATTGGTATGT TCTGTTGTGT ATACTTTAAT GTTTCACATT CTTTATACTG GATTATTTTA GCCGTTACGT TATCGAACTT TCCGGTGTTC ATATACATGT GCCTTACCGT TTACAGAAAG TTTCATTACT CCTGGAACGA TGTAAAAGAT CTGTTTGATG GTAAGGATTA TTTTATGCCG CTTATCATCA TGGGGGCTGT ATCGCTCATT TCCGGCAAGT TGCTGGATTA TATTGTTCGT GAAATTGCCT TTGATTTAAT CGGTCCGTAT GAAACCGGCT TGTGGCAATC GGCGGTGAAG ATCTCACAAG CGTTTGTATT TTTATGTGGT GCATTTCTAT CAACCATCTT TTATCCGTAT GCATCAGAGT GCATTAAAGA TAAATCAGCC TTACATAATT ATGTGAAAAA GTTTATGCTG CTGTATGCTC CTGTTACATT GATTGGTGTA GCAGCGATGT TTATACTGAA AGGATTATTA TTTCAGATTT TATTTTCAGA AGAATTCATA CAGGCAGATA AATACTTCTT ATTGATCCTG ATCGGCGATT GGCTGCGTTG TTTGTCGTGG GTAGGCGGCT ATTTGCTGAT GGCTTCTTCC GATACGCGTC GTTTTATTTT ATTTGAAATT ATTTCCGGTG TCGTATTTAT TCTTGTCTTT ATTTTAGGAA CGGATTATTT TAGCTGGGAA GTAATGGCGG TGGCAAACCT GATCCGTTAC ATCGTCTATT CAATACTGAT GCTTTTTTAT TATAAACGTG TATGGATGCT GAAAGAGAGC CGCTAG
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Protein sequence | MNQIRNSFFS LISIFLNVAF GFVYNKIVSV YFGPIGLSLL THYQNLVAFF MHIPQEGIHK AFINQLTQEE DSKKYTGKII VHTVVWNVII FLMQWVCLLV YMYWAESPLE ELFVDWKASL LIGVSFFLFV LNLLASSWMV ARHKLKRYAV YTFLLGITSV IGMFCCVYFN VSHSLYWIIL AVTLSNFPVF IYMCLTVYRK FHYSWNDVKD LFDGKDYFMP LIIMGAVSLI SGKLLDYIVR EIAFDLIGPY ETGLWQSAVK ISQAFVFLCG AFLSTIFYPY ASECIKDKSA LHNYVKKFML LYAPVTLIGV AAMFILKGLL FQILFSEEFI QADKYFLLIL IGDWLRCLSW VGGYLLMASS DTRRFILFEI ISGVVFILVF ILGTDYFSWE VMAVANLIRY IVYSILMLFY YKRVWMLKES R
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