Gene CHU_2506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2506 
Symbol 
ID4185646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2880253 
End bp2881182 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content39% 
IMG OID638072499 
Productb-glycosyltransferase 
Protein accessionYP_679102 
Protein GI110638893 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCTG AAAGAGAGCC GCTAGTCACC ATCATTGGTT TAAGTTACAA TCACGCTCCT 
TATATAAAAG CTGCTTTAAT CTCTCTATTT AATCAGTCGT ATTCCAACAT AGAAATTATT
CTGGTAGATG ATGCAAGCAC CGATGGAAGT GCTGCTATTA TTCAGGAATT GATTCAGGGA
AAGAATATTG TTTTCATTCA AAACCATATC AATCAGGGTA ATTGTATTTC GTTCAACAGC
GCTTTGAAAA TAGCGAAGGG GAAATATATT GTTGATTTTG CTTTAGACGA CATATTGTAT
CCGGATCGAA TCAAAAAACA AGTTAACGTA TTAGAAGCGG CAGCTGATAA CGTTGGCGTG
GTGTTTACCA ATGTTGATAT TATGGATAAA AAAGGCAATC TGCTTCAAAC GCATTATCCG
GCGTATTATC ATCCTTTGCA TAGAACAGCC ATTCCGGAAG GTGAGGTGTT TGAAGCTGTA
TTGAGCAGGT ATTACATCAA TCCGGTGAGC ATGCTGGCTC GCAGAACTGT TTTCGATAAA
CTGAATGGAT ACGATGAACA GTTAGCCTAT GAAGACTTTG ATTTCTGGAT CCGTTCGTCC
AGACTTTTTA ACTATGTGTA TTTGCCGGAA ATCTTATCTG CCAAACGCCT TACGCCGGAT
TCGTTATCCG GTTTGTTTTA TAAAAAAAAC CAGGAACGCA TGTTTGCTTC TACGCTGGTG
GTTTGTAAAA AGGCATGGTG GCTATGTTCT ACCGAATCAG AAAAGAAAGC TCTTGTAGTA
CGTTGCCGCT ATGAGACCAG ACAGGCGCTT AACTATGGCT ATGGAAAGAT TGTTAAAGAA
TATTTAACGG TACTGAAAGA AGTTGATCCG TACTATTATT TGTATGCTCC TGTGGCATGG
GTGTTGCTGT CAGTTAAAAA ATACATCTAA
 
Protein sequence
MDAEREPLVT IIGLSYNHAP YIKAALISLF NQSYSNIEII LVDDASTDGS AAIIQELIQG 
KNIVFIQNHI NQGNCISFNS ALKIAKGKYI VDFALDDILY PDRIKKQVNV LEAAADNVGV
VFTNVDIMDK KGNLLQTHYP AYYHPLHRTA IPEGEVFEAV LSRYYINPVS MLARRTVFDK
LNGYDEQLAY EDFDFWIRSS RLFNYVYLPE ILSAKRLTPD SLSGLFYKKN QERMFASTLV
VCKKAWWLCS TESEKKALVV RCRYETRQAL NYGYGKIVKE YLTVLKEVDP YYYLYAPVAW
VLLSVKKYI