| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2504 |
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| Symbol | nagD |
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| ID | 4185644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2878431 |
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| End bp | 2879282 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638072497 |
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| Product | HAD superfamily sugar phosphatase |
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| Protein accession | YP_679100 |
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| Protein GI | 110638891 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01459] HAD-superfamily class IIA hydrolase, TIGR01459
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATCG AATCATTCAA ATCCCTCTTA CCTAAATACA AATGCATTTT CTTTGACGCA
TTTGGTGTGT TAAAAACCTA CAATGGTTTA TTGCCCGGCA TTGAAAATAC ATTTGATTAT
TTAAAAGCGC AGGGACAGGA TTATTATATT GTTACCAACG ATGCTTCCAG AAGTCCGGAA
CAATTAGCTG ACTCGTATCA CAAGCTTGGC TTGTTTTCGA TAACGGCAGA TAAAATTATT
TCGTCGGGAA TGATCACCAA GGAATACATT GATCTTAAAG TAGACGGTGG TATTGTTGCA
TACCTGGGTA CAGCAAACTC TGCAAACTAC CTGGTAAGTG ATGGCATAAA AATGCTTCCG
GTAAGTGCTA TTGACGATAG TAATATCGGT GAAGTAAATG CGCTGGTTTT ATTGGATGAT
GAAGGCTTTA ACTGGTTTCA TGACCTCAAT AAAACGGTAA ACTTACTGCG TAAGCGTACC
ATTCCTGCAA TTGTTGCCAA TACAGATAAT ACCTATCCAT TAACCAAAAC GGATGTGGCT
ATTGCTATTG GCGGTGTTGC TACCATGATC GAAAGTATTT TGGGCAGGCG TTTTATCCGT
TTCGGTAAAC CCGACTCGCA AATGTTCATG TTTGCCTATG ATATGCTGCG GCAAAAAATG
GAGATCAGCA AACGCGAAAT TCTGATGGTT GGCGATACAC TGCATACCGA TATATTAGGC
GGAAATAAAT TCGGACTCGA TACAGCGCTT GTGCTGACGG GTAATACACG GATTGATGAT
GCCGAAACTA AAATTAAATC GACGGGTATT GTACCAACAC ACATTTGTGA GTCTGCCGTA
ATTGAATTGT AA
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| Protein sequence | MQIESFKSLL PKYKCIFFDA FGVLKTYNGL LPGIENTFDY LKAQGQDYYI VTNDASRSPE
QLADSYHKLG LFSITADKII SSGMITKEYI DLKVDGGIVA YLGTANSANY LVSDGIKMLP
VSAIDDSNIG EVNALVLLDD EGFNWFHDLN KTVNLLRKRT IPAIVANTDN TYPLTKTDVA
IAIGGVATMI ESILGRRFIR FGKPDSQMFM FAYDMLRQKM EISKREILMV GDTLHTDILG
GNKFGLDTAL VLTGNTRIDD AETKIKSTGI VPTHICESAV IEL
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