| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2460 |
|---|
| Symbol | |
|---|
| ID | 4184410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 2822991 |
|---|
| End bp | 2827457 |
|---|
| Gene Length | 4467 bp |
|---|
| Protein Length | 1488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638072454 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_679057 |
|---|
| Protein GI | 110638848 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0925327 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCATTCAC AGAAAATATA TTTAAGATAT GAAGGTTACT TATATCCTAT GTATTTGTAT
TCAATCATAG ATCTGTGCTA TCTTTATAGA CTACTTATGA TGAACTTCCC CCCCTGTTAC
TTTTCATTAA ATAATAGAGT ATCTGATTAC TTATTAAAAG GTAATTTCAG CCCGGATACA
GATAAAACAA AATCAAAAAA ATATTCTTTT CATAACAAGA ATATAATCTC TTATAATAAG
GCACTTTTTA TTTTACTAGT GATTTTTACA TTTTTTCTTA ACGTTAATTT TTCTAATGCA
GCAATTACAA TCAGCTCAAT AACAACAACA GAAAGTACTT GTGGGAACAA TGGCACAGCA
ACAATTTCAG CAACAAGTAA TAAATCCAAT CCTTCCCTGA TGTACGAGAT TTTAGGTACG
GCTGCCATAC AAAATAATCC AACGTTTCCT TCTTTATTCC CCGGAACATA CACAGCGCGT
GTATATGATA TTGACTTCGT ATATAAAGAC CAGCAATTTA CTATAACCGG AAACTATACA
TTACCGGATA TGCAGCCTGT AACAATTAAT CCCATATGTC CGGGTGCTTC AGATGGAATG
ATCATAGGTA ACCCGGTAAC GGGAAGCGGC CGTGCTCCTT TCACATGGGA AATTGTAGAT
CCTGTTGCCA CAGCGCCACA GTCAAGTGAC AGTTTAAAAA ATTTAACAAC CGGCACCTAT
ACCATCAAAA TGACCGATGC ATGTCTCAAT TACCAGACAC GCACAGCCGT GCTGGTAAAT
GGCGGTACAG GCCTTTCGCA TTTTTATGAT GGAGTTCCTT CAGTGCAAAA GATAGGTTGT
GATACGGTTG CCTTCGCTAT GCAGATAAAG CTGTTTAAAG ACAAAGCGCA CATGCCTTTA
AAGCTTACTG TTAATACCAG TACAGGTACA CATGTAAGAT ACATCTATCC TACTCCACTT
GACACGATCA GTTACAATCC GGCCTTTTAT GAACTTCGCG ATACCATTCC GGGAATAACC
TATAGCAGTT ATATTTATGC ATATATTACG GATACATGCG GAAATTCTAT TTATGCCACC
AGGGCATCAA CAGCTCCTTT TGAATTTGAT CTGGAATACA GTAGTGTTGT AAACTGCGGT
AATAAATTAG CAGCAACGTT ACGGATGAAA AATCCGCCAT TTTACCCATA CGTCTGGACA
GCATTCAATG CGCCTCTTAC CTATACATTA AAAGACAATT CAAATACAAC TGTAGATTCA
TCTGCTTGTA CATATAGCTA TTGCAATATG TTGATCAGTC CGCAGGTAGC CGGAAAAACA
TACACGTTAA AAGTAACAGA CGGCTGCGGA ACCGTTTATA ATAAAACATT TGTATGGCAA
GTAATTGCTC CGCCCAGAGT TGATTATTCC ACAGGTACCG GTTGTATGGA TTCAACAGCA
ACCGGGTCTT TTAATATTTA TAATTTTACT TCTGCTGTAA CTGTTACATT ATTATCAGGA
CCAACGTCTG TTCATAGCAG CAAGCCTAAG TATGCATTTT CAGATGTCAT TACCTATCCC
AAGATATTCA TACCAAATGC CTATAATGGG CTTTCCGTTA AAAATCTTAC TGCAGGAACA
TATACATACC GAGTGGCTGA TACCTGCGGA AATCTCGTGA ACGGATCTTT TACCGTACAA
CCCGAACAAC TGACAGACTT TAATTATTCA TACAAAATAA AACGCGGATG TCTTGGCAAT
AATATGTTGT ATTTCGATGC ACGAAGCAGC AATACCATTA GTGTTTATGT GAAAAATGTA
GAAACAGGAG TTACCCTGTA TCAGCGCAGA GGCTTTGATG CTGTTGATTC CATTCCTTCG
GTGGCTCCGG GAAAGTATGT AATGAGTATT TATTATGGAT ATGATCCCAT GGGTGGCGGT
GTATACAATG GTTCAGCTAC AGATAATAAT GCTGATTGCT GGCATGTAGA CGATACGATC
ACTGTGCTTC CATACAGCAG TAATGTATTC CAATCCAATA CAACTATTTT TTGTAATGGT
ACAAGTTATG TAGAACTTAA TGTAGACAGT ACCCGTGGTG TGCCACCTTA CAGGTACGAG
ATCATTTCAG GTCCGGCTAC ATTTGGTTTG CAGGATAACA ATGTATTTCA ATTACCAACA
TATGGAACAT ATATTATCCG GATCCGTGAT GCCTGCGGCA ACAGTAATAG CAGACAGATC
TCCGTTGACT CTGCTAAATT TCCGCCTATT ATAAAAAAAG GTGCATCCTG TACCGGGAGC
AGGATTGTAT TGAAAGGAAC CAGTGCACGA TTTTTTTCTT ATGAATGGAA ACGACCCAAC
GGCACCACCT ATGCCGGAGA TTCGCTTGTT ATTGATCCGC TGGGGCCTGC AGATACGGGT
ACATACAGCA TCACTAAAAA AGTTACCATC AACGGCTGTA CAGATATTTT CAAATCAACC
TACCAGGTTT CATTGCATGA TCTTTCCGAA CAAACGTTTC CGTTTTGTGT AGGTACTGCA
ATCCATGTCG GTACACATCT ATACACCTTA CCGGGTATAT ACAGAGATAC ATTAAAAAAT
GGGCTGGGAT GTGACAGCAT TATTATTACA ACAATAAAAA AGATGCCGCA AAAAACAGAT
ACTACTAACG TATCTATTTG TAAAGGAAAT CACATTACTG TAGGAAGCAA TACGTACAAT
ACAACTGGTA TTTACAAAGA TTCTGTACAG AATATATCCG GATGTTACGA TTTAATTCTT
ACAAAATTAT ATGTATATGG AGATCCTGAT ACAGTAAAAA TAAACACATG TGTGGGGTAT
CCATTAGTGG TCGGGGCACA TACGTATACG ACTACAGGCA TGTATACAGA CACATTAACA
TCCTCCCTTG GGTGTGATAG CATTATTGTA CATGACCTCA CCGTTACCCC TTATCCGGAA
TTTCCTGTAG CAAAAACAAT TTGTGCAGGA GAAAGTTTTG CCTTCTTAAC ACATACGTAT
ACGCAAGCAG GTATTTACCG AGATACGATC CAATCTGCAT CCTGTAAAAA TATTATTGTG
CTTACACTAA CGGTTAATCC TTACAAAAAA GATTCAATTG TTAAAGTTAT ATGTGAAGGT
GAAAAATATA GTACAGGCGG ACGCACCTAC ATACAAACCG GCATATACAG AGATACGGTA
TCCACTTCCG GATGCGACAG CATTACAATT GTAAATCTTA CCGTACTTCC ACTTAAACGG
AATACGCTTG TACGCAGCAT CTGTGAAGGG CAAAGCGTAA CAATCGGCAC ACATAGCTAT
AAACAAACCG GTATTTATAA GGACACACTT GCAACAGCAG GCTGCGACAG CATTGTTACT
CTTGACCTAA CGGTACATCC GTTCAAACGA AATATGCTCA GCAAAACAAT TTGCGCAGGA
GAAAGTATAC AGGTTGGCCC GCATATTTAT AATCAGACAG GCATTTATGC AGATACCTTA
GCAACAACAG GCTGCGACAG CATTGTTATA CTCAACTTAA CAGTGACAGC TCCTCCGGAT
GTATCACTCG GAAAAGATAC CTCTCTCTGC ACGGGCGCAT CCTTAGTGTT ACAGGCAAAT
ACAGGTTATG CCGCTTATTA CTGGAACGAT AATGTACTTG CTGCTGCTTC TTCAATTACT
GTAACAGCTG CCGGAAAATA CTGGGTGAAT GTACAGGATC AATTTGGATG CACGAAAAAT
GATACGATGG AAATACTGCA TGTATACCCA TTACCAACGG CCGATGCAGG TCCAAATACA
ACAGCCTGCT ACGGTGAAAG CATTCAGCTG TCTGCGGGTG GTGGCATCAG TTATGTATGG
ATGCCCGGTA ATATGCAGCA AGAAACGGTA ACCGTGTCGC CGCTTACACA TACAACGTAT
CGTGTAACAG TAACTGATAT AAATCATTGC TCGGCTTCAG ACGATGTTGC TGTAACTGTA
TACCCTAAGC CGGCCTCCCT CTTTTCTGCC GCAACAATCG ATCATTGTTT TGACGAAGGC
CCGACAGCAC TTACCGCAAA CTGGGGACAA TCTTTTCTCT GGCTTCCTTC CGGAGAAATC
ACCCAAACCA TTCAGGTAGC GCAGGAAGGT ATTTATACTG TTACCGCAAC CGATCTAAAT
CATTGTTCCT ATTCAGAACA GATTTCATTA AGAAATATTT GCGAAACAAA AATTTTCGTT
CCTACCGGGT TTACACCTAA TGGAGACGGT CTGCACGATG ATGTAGAAAT TTTCGGAAAA
AATTTTACAA ATTTTAAAAT AACCATTTTC AACAGATGGG GTGAAATCAT ATTTATTTCT
ACAGACAGAG AAATACGCTG GAACGGTATG TATCGCGGAG AAGAAATGCC TATTGGCAGT
TATCCCTGGA TAATAAGTTA TGAAAGTATC TTCGATACAA ATCATACAGA ACAGAAGTTA
AATGGCAGCA TTACACTTAT ACGTTAA
|
|---|
| Protein sequence | MHSQKIYLRY EGYLYPMYLY SIIDLCYLYR LLMMNFPPCY FSLNNRVSDY LLKGNFSPDT
DKTKSKKYSF HNKNIISYNK ALFILLVIFT FFLNVNFSNA AITISSITTT ESTCGNNGTA
TISATSNKSN PSLMYEILGT AAIQNNPTFP SLFPGTYTAR VYDIDFVYKD QQFTITGNYT
LPDMQPVTIN PICPGASDGM IIGNPVTGSG RAPFTWEIVD PVATAPQSSD SLKNLTTGTY
TIKMTDACLN YQTRTAVLVN GGTGLSHFYD GVPSVQKIGC DTVAFAMQIK LFKDKAHMPL
KLTVNTSTGT HVRYIYPTPL DTISYNPAFY ELRDTIPGIT YSSYIYAYIT DTCGNSIYAT
RASTAPFEFD LEYSSVVNCG NKLAATLRMK NPPFYPYVWT AFNAPLTYTL KDNSNTTVDS
SACTYSYCNM LISPQVAGKT YTLKVTDGCG TVYNKTFVWQ VIAPPRVDYS TGTGCMDSTA
TGSFNIYNFT SAVTVTLLSG PTSVHSSKPK YAFSDVITYP KIFIPNAYNG LSVKNLTAGT
YTYRVADTCG NLVNGSFTVQ PEQLTDFNYS YKIKRGCLGN NMLYFDARSS NTISVYVKNV
ETGVTLYQRR GFDAVDSIPS VAPGKYVMSI YYGYDPMGGG VYNGSATDNN ADCWHVDDTI
TVLPYSSNVF QSNTTIFCNG TSYVELNVDS TRGVPPYRYE IISGPATFGL QDNNVFQLPT
YGTYIIRIRD ACGNSNSRQI SVDSAKFPPI IKKGASCTGS RIVLKGTSAR FFSYEWKRPN
GTTYAGDSLV IDPLGPADTG TYSITKKVTI NGCTDIFKST YQVSLHDLSE QTFPFCVGTA
IHVGTHLYTL PGIYRDTLKN GLGCDSIIIT TIKKMPQKTD TTNVSICKGN HITVGSNTYN
TTGIYKDSVQ NISGCYDLIL TKLYVYGDPD TVKINTCVGY PLVVGAHTYT TTGMYTDTLT
SSLGCDSIIV HDLTVTPYPE FPVAKTICAG ESFAFLTHTY TQAGIYRDTI QSASCKNIIV
LTLTVNPYKK DSIVKVICEG EKYSTGGRTY IQTGIYRDTV STSGCDSITI VNLTVLPLKR
NTLVRSICEG QSVTIGTHSY KQTGIYKDTL ATAGCDSIVT LDLTVHPFKR NMLSKTICAG
ESIQVGPHIY NQTGIYADTL ATTGCDSIVI LNLTVTAPPD VSLGKDTSLC TGASLVLQAN
TGYAAYYWND NVLAAASSIT VTAAGKYWVN VQDQFGCTKN DTMEILHVYP LPTADAGPNT
TACYGESIQL SAGGGISYVW MPGNMQQETV TVSPLTHTTY RVTVTDINHC SASDDVAVTV
YPKPASLFSA ATIDHCFDEG PTALTANWGQ SFLWLPSGEI TQTIQVAQEG IYTVTATDLN
HCSYSEQISL RNICETKIFV PTGFTPNGDG LHDDVEIFGK NFTNFKITIF NRWGEIIFIS
TDREIRWNGM YRGEEMPIGS YPWIISYESI FDTNHTEQKL NGSITLIR
|
|---|
| |