Gene CHU_2459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2459 
Symbol 
ID4184409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2821847 
End bp2822911 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content41% 
IMG OID638072453 
Producthypothetical protein 
Protein accessionYP_679056 
Protein GI110638847 
COG category[L] Replication, recombination and repair 
COG ID[COG1533] DNA repair photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0853217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGATA ATAATGAATT AATTAAAGGC AGAGGTGCGC AGATGCAGGC AAAGAGCCGT 
TTTCATGCAC AGGAAATTGT TCAAGAGCAT ATGGAAGGTA TTGATGAAAT TACAGACATC
AACACCCCTA CTCAATATCT GTATGAAAAT GCAAAACAGA TCGTAAATAA AGTTGACAGT
CCGGATATTG GCCTTGCTTA TTCCATGAAC CCCTATCAGG GATGTGAGCA TGGCTGTATT
TATTGTTATG CGCGGAACAG TCATGAATAC TGGGGCTACA ATGCAGGAAT AGATTTTGAG
AAAAAAATAA TTGTGAAGCG CAATGCTGCA AGTGTATTGG CTAAGACATT TGAAAAACCA
AACTGGGAAG TATTACCCAT TATGTTTTCA GGCAATACAG ATTGTTATCA GCCTATTGAA
CGTAAATTAC AGATTACCCG GAACATGCTG CAAGTAATTG CAACCTATAA GCACCCGGTT
GGTATGATCA CCAAAAATCA TTTGATCACA CGAGACATAG ATATTTTAAA AGAACTTGCC
GCACAACAGC TTGTACATGT GAGTATCTCC ATTACTTCTG CACGGGATGA GATCAGACAG
AAATTAGAGC CGCGAGCTTC GGCTATTTCG CAGCGCTTAA AAACGGTTGA AGCGTTAGCA
AAAGAAAACA TACCGGTGAA TGTAATGATC GCGCCGATCA TTCCTGGTAT CAACCATCAT
GAGATTCCAC AGATCATGAA ACAGATTGCA GACGCAGGAG CATCTTCAGC AGCTTATACC
ATTGTGCGGC TGAATGGTTC TATTGGCGTA GTGTTTGAAG ACTGGATCCG AAAAGCCTAT
CCCGACCGTG CAGATAAAGT ACTGAATCAA ATTAAAGAAT GTCATGGTGG TACGCTTAAC
GACAGCCGTT TCAGCACCCG CATGCGCGGA CAAGGAAATA TTGCTGCAAG TATACATGAC
CTCTTTTATG TATCCAGAAA AAAATATTTA TCGGGCAGAG AATATCCACC ATTACGTACA
GATTTATTTG TGCGAAGTAA CAAAGGGCAA TTAGGTTTGT TCTGA
 
Protein sequence
MEDNNELIKG RGAQMQAKSR FHAQEIVQEH MEGIDEITDI NTPTQYLYEN AKQIVNKVDS 
PDIGLAYSMN PYQGCEHGCI YCYARNSHEY WGYNAGIDFE KKIIVKRNAA SVLAKTFEKP
NWEVLPIMFS GNTDCYQPIE RKLQITRNML QVIATYKHPV GMITKNHLIT RDIDILKELA
AQQLVHVSIS ITSARDEIRQ KLEPRASAIS QRLKTVEALA KENIPVNVMI APIIPGINHH
EIPQIMKQIA DAGASSAAYT IVRLNGSIGV VFEDWIRKAY PDRADKVLNQ IKECHGGTLN
DSRFSTRMRG QGNIAASIHD LFYVSRKKYL SGREYPPLRT DLFVRSNKGQ LGLF