Gene CHU_2454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2454 
Symbol 
ID4186582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2815226 
End bp2815819 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content39% 
IMG OID638072448 
Producthypothetical protein 
Protein accessionYP_679051 
Protein GI110638842 
COG category[S] Function unknown 
COG ID[COG2849] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.298933 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACACAC TCCTGCCGGT TAGTGCGCAA AGTAGCGATA CGCTTAAAGA ATTTTATTCT 
AATGGAAAAC TGAAATCAAA AGGAATAAAA CAGGAAGGGT TACGAGAAGG AAATTGGTTT
TATTATTATC CCAATGGAAA CTTATCTGCA CGGGAACAAT ATAAGAGTGA TATGCTTGAT
GGTACTTCCT GGTATTACGA TACACTTAAT CATGTGGTAG CGAAAGAACA GTGGAAGCGG
GGCATGGAGC AGGATAGTGC CTGGTATTAC TACAGCAATG GAAACCTGAA GCGTGCAGGT
GTATATGCAT TTGGCATGTA CAAAGGTGTG TGGCACAGTT ACCATGAAAA CGGAAAATTG
AAATCTGTTG GACCGTATGT GAATGGAACA CCAAATGGTG TATGGGTATT TTATTCAGAA
GCAGGTGTTA TAACCGAAGA GTACACATAT GTAAATGGTG TATTAAACGG TCCGGCAAAA
TTATACAACA ACGGAATCTT ATCTGCTGCA GGCAAGATGG AAAAAGATGT ACCGGTGGGC
TGCTGGCAGT ATTATAATAA AAAAGGAAAG GTAATTAAGA CAAAAACATT TTGA
 
Protein sequence
MYTLLPVSAQ SSDTLKEFYS NGKLKSKGIK QEGLREGNWF YYYPNGNLSA REQYKSDMLD 
GTSWYYDTLN HVVAKEQWKR GMEQDSAWYY YSNGNLKRAG VYAFGMYKGV WHSYHENGKL
KSVGPYVNGT PNGVWVFYSE AGVITEEYTY VNGVLNGPAK LYNNGILSAA GKMEKDVPVG
CWQYYNKKGK VIKTKTF