| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2448 |
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| Symbol | rsaD |
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| ID | 4186576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2810475 |
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| End bp | 2812259 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638072442 |
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| Product | ABC transporter, ATP-binding |
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| Protein accession | YP_679045 |
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| Protein GI | 110638836 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.946245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGAACT GGGCATTAAG TCATTTAAAT AAATATCTTT TCCAATACAG ATATTACCTG
CTTGCAGGTA TAGCATTCGT GTTTTTAAAC AATTTTTTCG GAAGTTATCA GGGGCCGGTT
ATCCGCGAAA CCATCGATTA TCTGGAGCAA TCCTTACCTG CCTTAAAACA GGCTGCAGGA
ACTGAAAAAG TTACTCTCCA GGCTGAATTC GGTTCAAAAG TAACGTTTCT GGTACTGCAG
ATCCTTGGTT TAACCATATT GAGCGGTATT TTCCTGTATC TGCAGCGCAA GATCATTATC
GGCACCTCCC GCCGCATTGA ATACGATGTA AAAAATGAAA TCTACGATCA TTACCAGCAG
CTTCCGGTAA GCTTTTATAA GCGCAACAAC ACCGGCGATA TCATGAACCG GATTTCAGAA
GATGTGAACC AGGTGCGTAA CTACCTGGGC CCTGCCCTGA TGTATGGCAT GAACCTGTTT
GCCATATTCA TTGTAACTGT TCCGATCATG CTTTCGGTGA GCACGGAATT AACGTTATAT
ACACTCATTC CATTGCCGTT CCTGGTGATC AGTATTTACA CCGTACAGAA TGTTATTACC
AGGCACTCTG AAGAAATACA GCGCAGCATG TCGCGTTTAT CTTCGCTGGT GCAGGAAACA
TTTTCAGGTA TCCGTGTGGT GAAATCGTTT GGCAGAGAAA CTTCCATGAC AACACAGTTT
GATGCGCAAA GCAACGAGTA TAAATCAAAA TCCATTCACC TGACACAGAT TAATGCCTTG
TTTTTTCCGC TAATGGTCTT TTTGATCGGT GCTTCCATCA TCTTTATTGT CTGGATCGGT
GGTAAAAAAG TAATTGCCGG TGAAGGTGTA ACGAATGGAA ATATTGCAGA ATTTATTTTC
TACCTGAATA AACTGGCCTG GCCGGTTACT TCTCTGGGCT GGATCACTGT GATGATAAAG
CGTGCCGAGG TATCGCAGGA ACGTATCAAT CAGTTTTTAA AACAGAAAAA TACCCTTCTT
AAAGGAAAAG AAATTACTAC CCCTATTAAA GGCGCGATCG CATTTAAGGA TGTTTCTTTT
ACCTATCCCG ATACGGGCAT TGAAGCCAGT AAGCACATCA GCTTTATGGT TGCACCGGGT
CAGACACTTG CAATTATCGG CAATACCGGT TCAGGTAAAT CAACCATCGC TTCATTGCTT
TGCCGCTTGT ACGATACAAG TTCCGGCGAC ATTGAAATTG ATGGCATATC CATACGTGAT
TATAACCTGC AATTCCTGCG CAGCCAGATT GGTTTTGTAC CACAGGATGT ATTCCTGTTT
TCCGATACCA TCCGCAACAA CATTGCCTTT GGTTTTGACA ATGTAACGGA AGAACAGATC
ATTGAAGCAG CAAAATTTTC CGACCTGTAC ACCTCCATTC AGCATTTCCC GATGGGTCTG
GATACCATTT TAGGTGAGCG CGGCATTACC TTATCGGGCG GTCAGAAACA ACGCCTGTCG
CTGGCACGTG CATTTATCAG AAATCCACGT TTATTTATCC TGGATGATTG TTTATCTGCT
GTTGATACCA AGACAGAAGA TACCATTCTG AATAATTTAA AAGTTGTCTT AGGAGACCGC
AGTACAATTA TTATCTCACA TAGGGTCTCT TCGGTGAAAC TTGCGGACAA AATTATCGTT
TTAGAAGATG GACAGATTGC TCAAAGCGGC TCGCATGAAG AATTAATGGA TAAAGAAGGT
ATTTACCGGA ATATTTATCT GAAGCAATTA CACGAAACGG TGTAA
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| Protein sequence | MKNWALSHLN KYLFQYRYYL LAGIAFVFLN NFFGSYQGPV IRETIDYLEQ SLPALKQAAG
TEKVTLQAEF GSKVTFLVLQ ILGLTILSGI FLYLQRKIII GTSRRIEYDV KNEIYDHYQQ
LPVSFYKRNN TGDIMNRISE DVNQVRNYLG PALMYGMNLF AIFIVTVPIM LSVSTELTLY
TLIPLPFLVI SIYTVQNVIT RHSEEIQRSM SRLSSLVQET FSGIRVVKSF GRETSMTTQF
DAQSNEYKSK SIHLTQINAL FFPLMVFLIG ASIIFIVWIG GKKVIAGEGV TNGNIAEFIF
YLNKLAWPVT SLGWITVMIK RAEVSQERIN QFLKQKNTLL KGKEITTPIK GAIAFKDVSF
TYPDTGIEAS KHISFMVAPG QTLAIIGNTG SGKSTIASLL CRLYDTSSGD IEIDGISIRD
YNLQFLRSQI GFVPQDVFLF SDTIRNNIAF GFDNVTEEQI IEAAKFSDLY TSIQHFPMGL
DTILGERGIT LSGGQKQRLS LARAFIRNPR LFILDDCLSA VDTKTEDTIL NNLKVVLGDR
STIIISHRVS SVKLADKIIV LEDGQIAQSG SHEELMDKEG IYRNIYLKQL HETV
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