| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2447 |
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| Symbol | nusB |
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| ID | 4186575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2809132 |
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| End bp | 2810301 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638072441 |
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| Product | antitermination factor |
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| Protein accession | YP_679044 |
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| Protein GI | 110638835 |
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| COG category | [K] Transcription |
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| COG ID | [COG0781] Transcription termination factor |
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| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.351781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.909176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGAATC GAAGAATTCT CCGTATCAAG GTAATGCAGT CGTTATATGC ATTATACCAA
ACGAAAGTAT CAAATTACCA TTTAGGTATG GATGAAATTA CGGAGTTATT TGCTCCTGAT
TTAATGTCAC CTGACGTACA GGATGTTCCA GCATTAGAAT TAAAAAAGAA AACTGCCCAT
GCTTCCTACG AAGCATTTTT TGAAAAGCAT GATACCGGCT ATACCGAAGC TGCACCGGAC
ATTCGCAAAG CAGTTACAGA AGCAATCAAT CAGTACCACA ACGCGCATAC CAGAGATGTT
AATCATTTTA AGAACATGCT GCTTGAAGAT GTAGCACGTG TTGAAATGAT GTATAAACTC
GTTTTGTTCA GTGCAACACG CCTTATGGCA ATTGCTGAAG CAGATGCCAA AGAGGGGATA
CATACCGTTG TTAAAAGCGA AGTGCCGGAA TATTTTTATA AGCTGAAAAA CAATCCTGTT
TTACTGGCCA TCGAAAAAAA TAAATCACTG AGGCTGTTCG TAGAAAAAAA TAAACTGAAC
CCGCCGGTTG ATTTGTTAAA AACGGTTTAC AAGAAAAAGA TCAAGCAGGA TCCGTTGTAC
ATCGAGTATC AGAAATTTCC CGAATCAACG TTTGAAAAAG ATAAAGAAAT CGTTCAGCAT
TTAGTTAAAA CATATTTGTT TAAAAATGAA CAGCTGGATG CATACTGGGA AGATCTGGAT
TACAACTGGA GTGAAAACGA TGAAGCCATC AGAAGCCTTA CACTAAAAGC AGTTAAGGGC
ATTGTTGAAA CAACAGATGA AATGTATGAA CTGCCGTCAT TGTCGCCAAA CTGGGAAGAT
GATCAGGAAT TTATGCTGGA ATTATACAAA GAGTCTACCG CGTTTGATGA TGCCGCTGAA
AAATTAATAA CAGATAAGGT ACAAAACTGG GACATTGAGC GTCTTGCTTT TACCGATCGC
ATTATACTGA AAATGGCATT GACAGAAATG GTGAAATTCC CGAATATTCC AGTAAAAGTA
ACCATTAATG AGTATATTGA GTTATCGAAA TCATATAGTA CACCGAAGAG TAAGCAATTT
GTAAATGGTC TGTTGGATAC TATTTCTATC GACCTGCAGA AGAGCGGCCT TATTCAGAAG
AGCGGCAGAG GTTTGATGGA TAATAAGTAG
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| Protein sequence | MLNRRILRIK VMQSLYALYQ TKVSNYHLGM DEITELFAPD LMSPDVQDVP ALELKKKTAH
ASYEAFFEKH DTGYTEAAPD IRKAVTEAIN QYHNAHTRDV NHFKNMLLED VARVEMMYKL
VLFSATRLMA IAEADAKEGI HTVVKSEVPE YFYKLKNNPV LLAIEKNKSL RLFVEKNKLN
PPVDLLKTVY KKKIKQDPLY IEYQKFPEST FEKDKEIVQH LVKTYLFKNE QLDAYWEDLD
YNWSENDEAI RSLTLKAVKG IVETTDEMYE LPSLSPNWED DQEFMLELYK ESTAFDDAAE
KLITDKVQNW DIERLAFTDR IILKMALTEM VKFPNIPVKV TINEYIELSK SYSTPKSKQF
VNGLLDTISI DLQKSGLIQK SGRGLMDNK
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