| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2436 |
|---|
| Symbol | yiaD |
|---|
| ID | 4186565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 2799692 |
|---|
| End bp | 2800654 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638072431 |
|---|
| Product | outer membrane protein |
|---|
| Protein accession | YP_679034 |
|---|
| Protein GI | 110638825 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATT TTGTACGCAT CTTAATTTTA TTACTTGTAC TATCAACGAC AAGTACCATT
GAGGTATCCG CTCAAAACCC TGCCCAAAGC AAGAAATATC AGAAAAAAGC CAAGGCAGCT
AAAAAGAAAA AGAAAGATCC ATATACTCCT GTATATCACG ATGCTGATTC AGATCATGAT
GGTGTACCGG ATAGCCGCGA TCAATGCATC CATACACCCA AAGGCGAACC TGTAACACCA
TTCGGCTGTC CGTATGATGT GGATTTTGAC GGGATCTTTG ACTACGAAGA TTCATGCAGA
AATGAAGCAG GGCCAAGAGA AAACCATGGC TGCCCTTGGG GAGATAAAGA TGGTGACGGA
ATCATGGATA ACGTAGATGA CTGTCCTACT GTACCCGGTT TAAAAATGTA CAAAGGTTGC
CCCGATACAG ACGGTGATGG TATTCCGGAT AATAAAGATA AATGCCCGAA AGTACCGGGA
ACACTTCAGT ATGATGGTTG CCCTCCGCCA TTCAAAGACA GTGATGGCGA TGGTGTAGAA
GATTATTCCG ATTTATGCCC GAGTACACCT GGACCAAAAA CAAACAGAGG CTGCCCGGAA
TTGAAACCGG CAGAAAAAGC AGCGCTTCAA AAAGCATTTG ACAACTTATT GTTTGAAACA
GGTTCAGATG TTATTGTTTC TTCTTCTTTC CAATCGTTAG ATGATTTAGC AAAAGTGTTA
AGAAATAACC CGCTTTATAA CCTGTACATT GAAGGCCACA CGGATAATGT AGGTGATGAC
GAAGCGAACC TTGACCTCTC AAAACGTCGT GCGATATCTG TTAAAAACTA CCTTGTTTCT
AAAGGTGTTG GTGCTGCCAG ATTAACAACA GATGGGTTTG GTGAAGCAAG ACCGGTTGAT
ACAAATGATA CACCGGAAGG CCGTAAGAAA AACCGCCGTG TTGAAATGCA TATCCTTCAA
TAA
|
|---|
| Protein sequence | MKHFVRILIL LLVLSTTSTI EVSAQNPAQS KKYQKKAKAA KKKKKDPYTP VYHDADSDHD
GVPDSRDQCI HTPKGEPVTP FGCPYDVDFD GIFDYEDSCR NEAGPRENHG CPWGDKDGDG
IMDNVDDCPT VPGLKMYKGC PDTDGDGIPD NKDKCPKVPG TLQYDGCPPP FKDSDGDGVE
DYSDLCPSTP GPKTNRGCPE LKPAEKAALQ KAFDNLLFET GSDVIVSSSF QSLDDLAKVL
RNNPLYNLYI EGHTDNVGDD EANLDLSKRR AISVKNYLVS KGVGAARLTT DGFGEARPVD
TNDTPEGRKK NRRVEMHILQ
|
|---|
| |