Gene CHU_2434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2434 
Symbol 
ID4183669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2796164 
End bp2796898 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content42% 
IMG OID638072429 
Producthypothetical protein 
Protein accessionYP_679032 
Protein GI110638823 
COG category[S] Function unknown 
COG ID[COG4760] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACAT CAAACCCTGC GCTAAACGAA TCTACTTTTG ATACCTATGC GGTTGCCGGA 
GAAGAGCGCA TGACAATCAG AGGCACAGTT AATAAAAGCT TCATACTGAT TGCCCTTGTT
TTTTCTACCG CTTTGTTATC CTGGGATTTC ATGACAGCTG GCGGAAACGG CGTTATTTAT
GTGATCGCTT CCGCTATTTT AGCATTAATT GTTGGTTTGG CAACATCCTT TAAACCAACC
TGGGCACCTT ATACAGCACC GGCATATGCC TTATTTGAAG GGGTGTTTCT AGGTGCACTT
TCCGGTTTCG TTGATGCAAT GTATCCGGGT ATTGCAATAC AGGCCGTATT ATTAACATGC
GGAACGTTTC TTTGTTTGCT TTTGGCATAC CGCTCCGGTT TGATCAAAGC AACCGAGAAT
TTTAAACTTG GTATCGTTGC TGCTACCGGT GCGATCGGCT TGATTTACCT CGCTTCATTC
GTTTTAGGTT TCTTTGGTAT TCAAATTCCA TACATCCATG GTAACGGTAT AATCGGAATT
ATTTTCAGCC TGGTTGTGGT GGTTATTGCA GCCTTAAACC TGGTATTGGA TTTTGATTTT
ATTGAACAGG GAGAAGCAAA AGGAGCTCCC AAATACATGG AATGGTATGC TTCTTATGGA
CTGCTTGTAA CACTTGTGTG GTTATATATT GAGATTCTGA AATTACTTCT GAAACTGGCG
AGCAGAAGAG ATTAA
 
Protein sequence
MRTSNPALNE STFDTYAVAG EERMTIRGTV NKSFILIALV FSTALLSWDF MTAGGNGVIY 
VIASAILALI VGLATSFKPT WAPYTAPAYA LFEGVFLGAL SGFVDAMYPG IAIQAVLLTC
GTFLCLLLAY RSGLIKATEN FKLGIVAATG AIGLIYLASF VLGFFGIQIP YIHGNGIIGI
IFSLVVVVIA ALNLVLDFDF IEQGEAKGAP KYMEWYASYG LLVTLVWLYI EILKLLLKLA
SRRD