Gene CHU_2421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2421 
Symbol 
ID4183656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2783891 
End bp2784592 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content36% 
IMG OID638072416 
ProductNUDIX hydrolase 
Protein accessionYP_679019 
Protein GI110638810 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCAG TAAAAATCAA TCAAAACATT AAGGTTGCCG TTGACGCGAT TGTTTTTGGC 
TATAGCAACA ATGCCTTGCA TGTATTACTT GTAAAACAAA AATTTGGTGC GCTTAAAAAT
AACTGGGTAT TAGCAGGAGG TTTTGTTAAA GACGGTGAAA CCTTATACGA AGCCATCAAC
AGAGAACTGC GCGAAGAAGC AGGTATCCAG GTTACCTATC TGGAACAGTT ATATACCTTC
GGAGACGATA TTCATAGAGA CCCAAGAGGC AGAGTCATTT CTGTTGCTTA TTTTGCTTTA
CTAAACTCTA CCGAACTTAA GTTGTCTGCT GATACAGATG CCAAAGATGC AAAATGGGTG
CCCCTGGATA AAATACCTAA ATTAGGCTTT GATCACAATC AAATCATTCA GGTAGCTTAT
GAACGTTTAA AAAGTAAGCT TACTTATCAG CCCATTGGGT TTGATCTGCT GCCAAAAGAG
TTTCTTTTTT CTGATCTGGA AAATCTTTAT TGTAACATCC TGCAAAAACA AATTGACCGC
AGAAATTTCA GAAAAAAGAT TCTGAGCTTC GGACTTTTAG AAGAAACAGA AAAATTTTCA
TCTGAAAAAA CTGGCCGACC GGCAAAACTT TTCAAATTCA ACAAAAAGAA ATACAACAAG
TTACACAAAG AAGGATTTAA TTTCGAAATT AAGTTTGCGT AA
 
Protein sequence
MESVKINQNI KVAVDAIVFG YSNNALHVLL VKQKFGALKN NWVLAGGFVK DGETLYEAIN 
RELREEAGIQ VTYLEQLYTF GDDIHRDPRG RVISVAYFAL LNSTELKLSA DTDAKDAKWV
PLDKIPKLGF DHNQIIQVAY ERLKSKLTYQ PIGFDLLPKE FLFSDLENLY CNILQKQIDR
RNFRKKILSF GLLEETEKFS SEKTGRPAKL FKFNKKKYNK LHKEGFNFEI KFA