Gene CHU_2418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2418 
Symbol 
ID4183653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2781308 
End bp2782273 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content46% 
IMG OID638072413 
Producttranslation factor SUA5 
Protein accessionYP_679016 
Protein GI110638807 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.85919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAG CATCAAAAAC GGGTGTAGAT ATTACACAAG CTAAACGATT ACTTGAAGAG 
AATCACGTTG TTGCTATACC AACAGAGACG GTTTATGGGC TTGCGGGCAA TGCATTAGAT
ATAAAAGCTG TAGCAACCAT TTTTTCTGTA AAAAAAAGAC CCAGTTTTGA TCCGCTTATC
GTACATACGC ATTCTATTGA AGCTTTAGGG GAATTTGTAG CGGATATTCC CGAGCAGGCA
CAGCTGCTGG CAAAAGCATT CTGGCCGGGA CCGCTAACTT TGCTGTTAGA AAAAAAAGAA
ATCATACCTG ATCTTGTTAC CAGCGGCTTA AACCGTGTTG CGGTTCGCAT CCCGAATCAT
CCGTTAACAC TGGCCTTGTT ACAATCCCTT TCTTTCCCGC TGGCTGCGCC AAGTGCAAAC
CCTTTTGGGT ATATTTCACC TACAACAGCA CAGCATGTTA CTGATCAGCT GGGCGATCAA
GTTGCTTATA TCCTGGACGG CGGTGCTTCC AACATTGGTG TTGAGTCTAC CATCATTGGC
TGGGAAAACG GCAAGGCTAC CGTAATGCGT GTCGGAGGTT TATCCATTGA AGCCATCGAA
GCCATAATCG GCCCGGTACA TGTTCAAGCG GTAAGTTCAT CCAATCCGGC TGCACCGGGT
ATGTTAAAAA GTCATTATGC CCCGCGTATT CCCATGCGTG CAGGAAACAT TGAAACACTG
CTGCAGACCT ATGCAGGTAA AAAAATAGCC GTATTATCTT TTCAGCAGGC ATACCCTGCC
GCATACAAAA ATTATATTCT ATCCCCTGAA GGAAATGTTA CAGAAGCCGC ACAGCATCTG
TTTGCCGCCA TGCGTGTATT AGATACCAGC GAAGCTGATA TTATCCTGAC CGAGTACGTA
CCCGCTGTTG GCTTAGGCCT TGCCATTAAT GACCGTTTGA AGAGAGCCTG CGCAGAAGAA
GTATAG
 
Protein sequence
MNKASKTGVD ITQAKRLLEE NHVVAIPTET VYGLAGNALD IKAVATIFSV KKRPSFDPLI 
VHTHSIEALG EFVADIPEQA QLLAKAFWPG PLTLLLEKKE IIPDLVTSGL NRVAVRIPNH
PLTLALLQSL SFPLAAPSAN PFGYISPTTA QHVTDQLGDQ VAYILDGGAS NIGVESTIIG
WENGKATVMR VGGLSIEAIE AIIGPVHVQA VSSSNPAAPG MLKSHYAPRI PMRAGNIETL
LQTYAGKKIA VLSFQQAYPA AYKNYILSPE GNVTEAAQHL FAAMRVLDTS EADIILTEYV
PAVGLGLAIN DRLKRACAEE V