Gene CHU_2408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2408 
Symbol 
ID4183838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2770149 
End bp2771099 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content42% 
IMG OID638072403 
Productcarbohydrate esterase family 1 protein 
Protein accessionYP_679006 
Protein GI110638797 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3509] Poly(3-hydroxybutyrate) depolymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.211104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTATGT GGAGGAAGTT TGAAGGTATG AAAACAGTAC AGCTCATTTG TATAAAAATG 
AGCTGTATTA TGCTGTTTTT TGTTTCCGGT TATGCAAAAG GCACACAGGA GGAACATACC
ATGCAGTTTG GTGAAGAGAA AACAACTTAC CTGCTTCATT TACCGAAAGG ATATATACAA
GGTAAAGCCT ATTCACTTGT TGTTAATTTT CACGGTCTGG GTTCAGCAGC AATAAAACAT
CAGCACTACT GCCAGCTTGA TGCCGTTGCC GACAAGGAAG GCTTTATAGC AGTGTATCCG
CAATCGTATC ACCAGGGCTG GAATGCAGGC CTGGGCTTTA CTTCATATAT TCAGGGGCAC
GATGACATTG CCTATTTCAA TGCCCTGTTA GATACACTTG AGGCTGCGTA TTCGATTGAT
AAAAACCGGA TCTATGTTAC AGGTGTAAGT TTAGGCGGAT CCTTTACTTA CCGCATTGCC
TGTGAAATGA GTAAACGTAT TGCAGCTATT GCCTCGGTAT CGGGGTTAAT GTCGGATAGT
ACACTGATTT ATTGTACACC GGAACGTAGC GTGCCCGTTA TGCATATACA TGGAACAAAG
GATCACATCA TGCGGTATAC GGGTATGAAG CAGGCATTTG GTGCGGAAGA AGTGGTGAGA
TTATGGGCAT TGAAAGATCA ATGTGAAAAC AAACCGGATA CGGTTTTTGT ACCCAATACA
AGTAAGAAAG ACCATACTTC TTCTATTCTC ATTAAGTATA CACATTGTGC AAATGGATCG
GAAGTCTGGT TTTATAAAAT CTATAATGGC GGCCATACCT GGCCGGGTGC TGCAAAGGCG
TTTAAGCTGA TGGGCAGAAA AAGTAAAGAT TTCAATGGCA GTCAGGCTAT CTGGGATTTT
TTTGAAACGT TTACGTTACA GACAGGTGTG AGCATGCAGA CAAGGAAATA A
 
Protein sequence
MIMWRKFEGM KTVQLICIKM SCIMLFFVSG YAKGTQEEHT MQFGEEKTTY LLHLPKGYIQ 
GKAYSLVVNF HGLGSAAIKH QHYCQLDAVA DKEGFIAVYP QSYHQGWNAG LGFTSYIQGH
DDIAYFNALL DTLEAAYSID KNRIYVTGVS LGGSFTYRIA CEMSKRIAAI ASVSGLMSDS
TLIYCTPERS VPVMHIHGTK DHIMRYTGMK QAFGAEEVVR LWALKDQCEN KPDTVFVPNT
SKKDHTSSIL IKYTHCANGS EVWFYKIYNG GHTWPGAAKA FKLMGRKSKD FNGSQAIWDF
FETFTLQTGV SMQTRK