Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2408 |
Symbol | |
ID | 4183838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2770149 |
End bp | 2771099 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638072403 |
Product | carbohydrate esterase family 1 protein |
Protein accession | YP_679006 |
Protein GI | 110638797 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.211104 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATTATGT GGAGGAAGTT TGAAGGTATG AAAACAGTAC AGCTCATTTG TATAAAAATG AGCTGTATTA TGCTGTTTTT TGTTTCCGGT TATGCAAAAG GCACACAGGA GGAACATACC ATGCAGTTTG GTGAAGAGAA AACAACTTAC CTGCTTCATT TACCGAAAGG ATATATACAA GGTAAAGCCT ATTCACTTGT TGTTAATTTT CACGGTCTGG GTTCAGCAGC AATAAAACAT CAGCACTACT GCCAGCTTGA TGCCGTTGCC GACAAGGAAG GCTTTATAGC AGTGTATCCG CAATCGTATC ACCAGGGCTG GAATGCAGGC CTGGGCTTTA CTTCATATAT TCAGGGGCAC GATGACATTG CCTATTTCAA TGCCCTGTTA GATACACTTG AGGCTGCGTA TTCGATTGAT AAAAACCGGA TCTATGTTAC AGGTGTAAGT TTAGGCGGAT CCTTTACTTA CCGCATTGCC TGTGAAATGA GTAAACGTAT TGCAGCTATT GCCTCGGTAT CGGGGTTAAT GTCGGATAGT ACACTGATTT ATTGTACACC GGAACGTAGC GTGCCCGTTA TGCATATACA TGGAACAAAG GATCACATCA TGCGGTATAC GGGTATGAAG CAGGCATTTG GTGCGGAAGA AGTGGTGAGA TTATGGGCAT TGAAAGATCA ATGTGAAAAC AAACCGGATA CGGTTTTTGT ACCCAATACA AGTAAGAAAG ACCATACTTC TTCTATTCTC ATTAAGTATA CACATTGTGC AAATGGATCG GAAGTCTGGT TTTATAAAAT CTATAATGGC GGCCATACCT GGCCGGGTGC TGCAAAGGCG TTTAAGCTGA TGGGCAGAAA AAGTAAAGAT TTCAATGGCA GTCAGGCTAT CTGGGATTTT TTTGAAACGT TTACGTTACA GACAGGTGTG AGCATGCAGA CAAGGAAATA A
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Protein sequence | MIMWRKFEGM KTVQLICIKM SCIMLFFVSG YAKGTQEEHT MQFGEEKTTY LLHLPKGYIQ GKAYSLVVNF HGLGSAAIKH QHYCQLDAVA DKEGFIAVYP QSYHQGWNAG LGFTSYIQGH DDIAYFNALL DTLEAAYSID KNRIYVTGVS LGGSFTYRIA CEMSKRIAAI ASVSGLMSDS TLIYCTPERS VPVMHIHGTK DHIMRYTGMK QAFGAEEVVR LWALKDQCEN KPDTVFVPNT SKKDHTSSIL IKYTHCANGS EVWFYKIYNG GHTWPGAAKA FKLMGRKSKD FNGSQAIWDF FETFTLQTGV SMQTRK
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