| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2405 |
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| Symbol | ycaJ |
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| ID | 4183835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2766944 |
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| End bp | 2768206 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638072400 |
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| Product | recombination factor protein RarA |
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| Protein accession | YP_679003 |
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| Protein GI | 110638794 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTGA TTCCGTTAGC AGAACGTATG CGCCCTGTTT TATTGCAGGA TGTATACGGA
CAACAACATT TGATAGGTGA GGGTATGGTA TTCCGCCGGT TTGTGGAAGA AGGCAAAATA
CCATCCATGA TTTTATGGGG ACCTCCCGGT GTTGGCAAAA CAACACTGGC GCAATTGCTG
GCAAAAACAG TTGGTTTGCC TTTCTATACA TTATCAGCAA TCAGTTCCGG TGTAAAGGAA
GTACGGGAAG TTATTGCGAA CGCACAGACA GACGGCAAGG CTGTACTGTT CATTGATGAA
ATTCATCGGT TCAGCAAATC ACAGCAGGAT GCCTTGCTGG GTGCTGTTGA AAAAGGGACG
ATTCAATTGA TTGGTGCTAC AACCGAGAAC CCTTCTTTTG AAGTGATTCC CGCATTGCTG
TCGCGCTGCC AGGTATATGT GCTGCAGCCC CTCAGCGAAG AAGAACTTGT GGAGCTGATG
CGCAGTGCGT TGAAAAAAGA TGCGTACCTG AAAACACGTT CCGTTGAAAT AAAAGAGCAT
GATTCTCTAT TGCGCCTTTC CGGCGGTGAT GCCCGCAAGC TGTTGAATTT GCTGGAGCTG
GTGATTGATG CATCTGGTAA AGATCCGATC GTGATCACCG ATGCCTATGT GCAGAAGATC
GCGCAGAAAA AAGTTGCGTC GTACGATAAG AACGGAGAGA TGCATTACGA CATTATTTCC
GCATTCATCA AATCCGTTCG CGGCAGTGAT CCCAATGCTG CTGTATACTG GCTTGCACGT
ATGATTGAAG GTGGCGAGGA TGTTGAATTT ATTGCACGCC GTTTGCTTAT TCTGGCATCA
GAAGATGTAG GCAATGCAAA CCCTACAGCA CTGGTGATGG CTACTACAGC ATTTGATGCT
GTCCGTTTTA TCGGCTGGCC GGAATCAAGG ATCATTCTTT CACAGGTTAC AACGTATCTG
GCTTCTTCAC CAAAAAGCAA TGCATCATAC ATGGCCATCA ATGAGGCACA GCAGCTGGTC
CGCTCGCATG GCGACCTTCC GGTGCCGATC CATTTGCGCA ATGCACCAAC AAAACTGATG
AAAGATCTGG ATTACGGGAA GGAATATAAA TATGCACATT CCTACGAAGC GAATTTTGTA
GAACAGGAAT ATATGCCGGA TAAACTGGCC GGGAAAAAAA TATTCGATCC GGGGAATAAT
GCACGTGAAC AGGAGCTGCG CACGTTTCTG CAGAAGCGCT GGAAAGAGAA GTATAAGTAT
TAG
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| Protein sequence | MQLIPLAERM RPVLLQDVYG QQHLIGEGMV FRRFVEEGKI PSMILWGPPG VGKTTLAQLL
AKTVGLPFYT LSAISSGVKE VREVIANAQT DGKAVLFIDE IHRFSKSQQD ALLGAVEKGT
IQLIGATTEN PSFEVIPALL SRCQVYVLQP LSEEELVELM RSALKKDAYL KTRSVEIKEH
DSLLRLSGGD ARKLLNLLEL VIDASGKDPI VITDAYVQKI AQKKVASYDK NGEMHYDIIS
AFIKSVRGSD PNAAVYWLAR MIEGGEDVEF IARRLLILAS EDVGNANPTA LVMATTAFDA
VRFIGWPESR IILSQVTTYL ASSPKSNASY MAINEAQQLV RSHGDLPVPI HLRNAPTKLM
KDLDYGKEYK YAHSYEANFV EQEYMPDKLA GKKIFDPGNN AREQELRTFL QKRWKEKYKY
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