| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2373 |
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| Symbol | yopH |
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| ID | 4186203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2735786 |
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| End bp | 2737102 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638072370 |
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| Product | protein-tyrosine phosphatase |
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| Protein accession | YP_678973 |
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| Protein GI | 110638764 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.191988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGCAG GCCAGGCAAG TTCTTTCCAG AAAAAATTTA CAGGGAAGGA ACCGGTTGAA
AAAATACAAC ATTACCTGCA TGTCGTTTTT AAGGAGCAAC TTGGAAAACT CTATACCGCA
AAGACGCATG AGAAAATGAA TCTGCTGTCG TATTATGAAT TTGATAACAT ATCGGCGGGC
AAACTGAAAG CTTCTATCGG TAATGTGTAC CAGGGAAACA TAGAGGCAAA CGAATTCATC
CTACATGCAA ATTCTTTTCC CAACCCGTTG AATTTTTATA AAAATGATTT AGATACCTAT
CTCAAAAATA ATAACATGTA TGCGTTTCAA TCCTATGTAC ATGGTGATCT GAACGGGGCT
AATATTATTA TTGATGCGCA GGACAATGTC TGGATCATAG ACTTTTTCCA TACGCACAGA
GGCCATGTAT TAAAGGATCT GGTAAAACTG GAAAATGACC TGCTGTATAT CTTTTCAGAA
ATGCATTCCG AATCTGATTT TCAGGAAGCG TTAAAAATCA GTGAAGTATT GTTTGCTGTT
TCGGATCTGC AGGCCTCGCT GCCGGATATA ACACAAACCG GAATTACAAA ACCGTCGTTT
GTGCGTGTCT ACAAAACGCT GTCTTATTTG CGGAGCTTAT ATAGTGATCT GGTAGAATGG
GATAGAAATC CGCTGCAGGT ATTTATTGCG CAGCTTCGTT ATTCCATGCA TAGCCTGATC
TTTGATGAAT GCAACCAATG GCAAAAAGAA TGGGCATTAT ACAATTCAGG TAAATTCAGT
CAGATCATCA GTAATAAGTT TTTAGAAACA GATAAACTCC GCATCGATTT TATTAAATCC
GATAAAATAG ATGCACACTC ACTTGCCCTT ACTATTTTGC CCGGAAGAAA GGATTACAGC
AGAGACCTTT CGGAAGATCT TAAAGAAATA AAAGAACAGC AGATTGATTG TGTGGTATCG
CTCATTACAA AAGACGAGAT GGATATGTAT GGTGTTCCGG AGCTTTTAGA CGTATATAAA
AAGCAGGGGG TTGAATGTCT GCATGTACCT GTTATTGATC AGAAAATACC GGTAAAAGCA
GAGATCGAAA GAATTAATGC ATTTATAAAC GCGCAGCAAA AAAAGCATAA GAAGGTATTG
ATTCACTGTG TCGGCGGGCT AGGCCGTTCA GGACTTGTGG CAGCCTGTTA TTTAAAATCA
TTGGGCTATC CTTCAGACGA TGCCATTAAA ATAGTGCGGG AAGCACGCTC ATCAAGAGCG
ATTGAAAGTA CAGAACAGGA AAAATTTGTA TATGATTACA ATGAACGTAC TGTTTGA
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| Protein sequence | MGAGQASSFQ KKFTGKEPVE KIQHYLHVVF KEQLGKLYTA KTHEKMNLLS YYEFDNISAG
KLKASIGNVY QGNIEANEFI LHANSFPNPL NFYKNDLDTY LKNNNMYAFQ SYVHGDLNGA
NIIIDAQDNV WIIDFFHTHR GHVLKDLVKL ENDLLYIFSE MHSESDFQEA LKISEVLFAV
SDLQASLPDI TQTGITKPSF VRVYKTLSYL RSLYSDLVEW DRNPLQVFIA QLRYSMHSLI
FDECNQWQKE WALYNSGKFS QIISNKFLET DKLRIDFIKS DKIDAHSLAL TILPGRKDYS
RDLSEDLKEI KEQQIDCVVS LITKDEMDMY GVPELLDVYK KQGVECLHVP VIDQKIPVKA
EIERINAFIN AQQKKHKKVL IHCVGGLGRS GLVAACYLKS LGYPSDDAIK IVREARSSRA
IESTEQEKFV YDYNERTV
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