| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2356 |
|---|
| Symbol | |
|---|
| ID | 4186186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 2716376 |
|---|
| End bp | 2718112 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638072353 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_678956 |
|---|
| Protein GI | 110638747 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4529] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.124336 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACAG AAAAGATAAT TAAACGAATA GCTCTTATTG GCGGCGGCCC GGGCGCCTTA
TACATTTGCA AGCATTTTAT TGATTCGAAA CGTACGGATA TAGAACTGTA CGTTTTTGAA
AAAACAGATT CACTCGGTGC GGGCATGCCC TATAGTGCTG CAGGAGCAAA CACCGAACAT
ATTGCCAATA TTTCTGCAAA TGAAATTCCG GAACTTATAA CTCCAATGCA GGAATGGATA
CATACGGTTC CGTTGAATAT ACTTCAAACA TTCGATATTG ATCCGTTGCA CTTTAATGAA
TATAAAGTAT TGCCGCGCTT ATTGGTAGGC TACTATTTAT CTGCCCAATT TAGGCTCCTG
ATAGATACCG GAGAAAGTAT GGGCATAAAG ATACATGTCC GTTTAAATCA CAATGTAACA
GACATTCAGG ATAAACCTGA AACAGATACC GTTTGTATTG AAAACGCAGA AATTGGTTCT
GAAGAATTTG ATGCCTGCAT CATTTGCACG GGTCATTTTT GGCCCAAAAC ATACGAAGAT
AACATTCAGG GATACTACGA CTCTCCTTAC CCCCCATCGA AACTGACATA TAAAATGAAC
CATGCTGTAG CGATACGTGG AACATCTCTG ACTGCTATTG ATGCGATACG GACGCTTTCA
CGCACGCACG GGCATTTCAA AGAAAGTAAC AATGGAATGC TTACTTACAC AATCAGTGAC
GATAATCCTT CTTTCCAGAT GGTTTTATTT TCAACAAGCG GTATGCTTCC TGCCATACGC
ATTCATACAG AAGAAGCGCA GCCATCAACG CATGATCTGC TCACTCCGGA AGTTGTAGAA
ACCAACAGAG CAGAGAACAA CGGCTTCTTA TCATTGAATT TTGTTTTTGA ATTCGCTTTC
AAAAATCCGC TTAAAGAAAA AGATCCGCAA TTCTATGCCT GTATTCAAGA TATGAATATG
GAGGCTTTTG TAACCTATAT GATGAACCAA CGGGAACAGA GAGACCCGTT TTTACTTTTT
GAGGCAGAAT ATAAAGAAGC TGAAACATCT ATCCAACGGA AACAACCTAT TTACTGGAAA
GAAATGCTGG CTGCCTTAAG CTTCACATTG AATTATCCGG CAAAGTATTT TTCTGCAGAA
GACATGAAGC GTCTTCATGA TACACTTGGT GAATTAATCT CCATCGTGAT TGCATTTGTG
CCCCAAGGTT CTGCCAGAGA AATACTGGCA CTGCATGCAG CTAATGTACT CAACATTATT
AAGGTAGATA AAAACAGCCA CATTGAGCCT CAGGAAAACG GCGGTATCAT TTATCAGTAT
AAAACTGAAA ACGATGAACC GGTTGCGTCA TTTTACAATA CCTTTATAGA TGCTATCGGT
CAAAAAGATT TACCGCTGGA AAAATTTCCG TTCAAAACAC TTCGTAAGGA AAACACAATC
AGTCAGGCAT GCTTAGCATT TAAAGATACT AAAGCAGCTG AGCAGGAAAT AAAAAAAGGA
AATAAGAACG TACACAAAAA AACGGACGCC ACCTATTTTA TGGATGTACC GGGTCTTGCA
ATCAACGATA GTTTTCAGGT AATAAACGAT TCAGGAATTG CAAATGAACG CATTTACATT
ATGGCTGTCC CGTTTATTTC AGGTTATAAT CCAGATTACT CCGGATTGGA TTTCTGTAAT
AAGGCTTCAC ACTTGATCAG CGGACACGTG CTTGCTGCAA AAACATATAA CGAATAA
|
|---|
| Protein sequence | MNTEKIIKRI ALIGGGPGAL YICKHFIDSK RTDIELYVFE KTDSLGAGMP YSAAGANTEH
IANISANEIP ELITPMQEWI HTVPLNILQT FDIDPLHFNE YKVLPRLLVG YYLSAQFRLL
IDTGESMGIK IHVRLNHNVT DIQDKPETDT VCIENAEIGS EEFDACIICT GHFWPKTYED
NIQGYYDSPY PPSKLTYKMN HAVAIRGTSL TAIDAIRTLS RTHGHFKESN NGMLTYTISD
DNPSFQMVLF STSGMLPAIR IHTEEAQPST HDLLTPEVVE TNRAENNGFL SLNFVFEFAF
KNPLKEKDPQ FYACIQDMNM EAFVTYMMNQ REQRDPFLLF EAEYKEAETS IQRKQPIYWK
EMLAALSFTL NYPAKYFSAE DMKRLHDTLG ELISIVIAFV PQGSAREILA LHAANVLNII
KVDKNSHIEP QENGGIIYQY KTENDEPVAS FYNTFIDAIG QKDLPLEKFP FKTLRKENTI
SQACLAFKDT KAAEQEIKKG NKNVHKKTDA TYFMDVPGLA INDSFQVIND SGIANERIYI
MAVPFISGYN PDYSGLDFCN KASHLISGHV LAAKTYNE
|
|---|
| |