| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2353 |
|---|
| Symbol | |
|---|
| ID | 4185143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 2713022 |
|---|
| End bp | 2713471 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 638072350 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_678953 |
|---|
| Protein GI | 110638744 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1943] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.404204 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0913355 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACACG CATTAAGCAA AATATGGATT CATGCTATTT GGTCTACTAA AAACAGAACT
GAACTTATTG AAAAACATCA CGAACAACAT ATCTACACAT TTATTAAAAA TCAATTTAAT
GAATGTGGAT GCTACATTAA AAATATAAAC GGCATGCCGG ATCACATACA TTGTTTGTTT
CTATTAAACA CACAGAAGTC TATTTCAGAA GTAATCAAAC AAATAAAAGG CAGCTCTGCC
CATTACATCA ATCAGAATAA TTTATGCTAC ACAACATTTT CATGGCAAAC TGGTTATGCT
GCTTATTCCG TAAGTGAATC AATCGTAGGA AAGGTTGACG CCTATATTCA AAATCAAAAG
ACACATCATG CATTAAAATC GTTTGAGCAG GAATACAATT CGTTGATTAA AATATATCAC
TCAGCACATG GTTTTAACCA TGGGTCCTGA
|
|---|
| Protein sequence | MSHALSKIWI HAIWSTKNRT ELIEKHHEQH IYTFIKNQFN ECGCYIKNIN GMPDHIHCLF
LLNTQKSISE VIKQIKGSSA HYINQNNLCY TTFSWQTGYA AYSVSESIVG KVDAYIQNQK
THHALKSFEQ EYNSLIKIYH SAHGFNHGS
|
|---|
| |