| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2340 |
|---|
| Symbol | |
|---|
| ID | 4185130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 2701810 |
|---|
| End bp | 2702796 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638072336 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_678939 |
|---|
| Protein GI | 110638731 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3735] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.868577 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAATAA AAACAAGTTT TCTCATAGTA ATTCATGCAC AATATGCTAA AAAAGTAGTG
GGAAAAAAAA TCTCTATTTA CTTCACTATC CACTCAGGAA TAAAGATTTT TGTTAAAATG
AAAACCTGCG CCAGAATCTC CTGTTTTTTA ATCCTTGCTG TCTGCTCTTT TTTTGATGCA
GCCGCACAGG GGAATTTCCT CTTATGGGAA ATAACAGGCA ACGGATTGGC AGATACGTCA
TATCTTTTCG GTACCATTCA CATACGCGAC AAACGCGTGT TCAATCTGGG AGATTCCACC
TATTATGCCA TTACACATAC AAAGGCACTG TATGGCGAAC TGAATCTGCA GGATAAATCA
GAAATGAAAC AACATGCACC GGAATTGCTG ATGCCATCCG GTACAAGCCT CCAGGCCATG
CTTTCAGCGC AAGACTATAA ACTGGTAAAA AAATACTGTA AAAAACATAT TGGTGTATAT
GCCTTGCTGA TCAATAAGAT CAAACCGATC TATATCTCAG CGGTTGTATC GGAAGATCTG
TTAAAAAAAG AAGAGAAGAA ACCGCTTGAC CTGTATCTGC AGGATTATGC AGCCAGGCAA
GGCAATGAGA TCGGCGGCAT TGAAACTTTT CAGGAACAAC TGTCCGTTAT TGATCTGCTG
CCGTTACAGG AGCAGGCAGA TATGCTGGTG GAACAGATTA AAAACATTGA TCAGGAAAAA
ATACTAATGG AACAGATGCT TCAGTTTTAT CTCAACGAAT CGCTGGATAG CCTGGAAATA
CTCGTGCAGG AAGATACGCT TTCGCAGGAG TTTAATGAAG CTATTCTGGA TGCGCGTAAT
AAAGTAATGC TCACGCGCAT GGAAACACAA ATGAACCGTG AGCCAACGTT TTTTGCTGTT
GGCGCCGCAC ACCTGGCCGG TGAAAAGGGG CTGGTGATTT TATTGCGGAA AGCAGGATAT
ACCGTACGAC CAGTTAAAAG AAAATAA
|
|---|
| Protein sequence | MIIKTSFLIV IHAQYAKKVV GKKISIYFTI HSGIKIFVKM KTCARISCFL ILAVCSFFDA
AAQGNFLLWE ITGNGLADTS YLFGTIHIRD KRVFNLGDST YYAITHTKAL YGELNLQDKS
EMKQHAPELL MPSGTSLQAM LSAQDYKLVK KYCKKHIGVY ALLINKIKPI YISAVVSEDL
LKKEEKKPLD LYLQDYAARQ GNEIGGIETF QEQLSVIDLL PLQEQADMLV EQIKNIDQEK
ILMEQMLQFY LNESLDSLEI LVQEDTLSQE FNEAILDARN KVMLTRMETQ MNREPTFFAV
GAAHLAGEKG LVILLRKAGY TVRPVKRK
|
|---|
| |