Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2312 |
Symbol | |
ID | 4185223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2679861 |
End bp | 2681168 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638072312 |
Product | hypothetical protein |
Protein accession | YP_678915 |
Protein GI | 110638706 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.414585 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATAGCGA AAACGTATAT CCGCATCTCT TTTCTTTTTC TTTCTTTCTG TTTATGCATC CATGCACTGT ACGCACACCC TGCAGATAGC CTGGTACGGC ATTTTTTACT GCAGGCAGAG ATCAGGCCAC GTTTGGAATA CAGGTATAAT TATACCCTCC CGCCTGCGGA TACGATTTCA CCTGATACAT ACATTACCCA ACGAAACCGG GTATCGATGC TGTATGCAAG AAAGAAGTGG ATACTGAAAG CGGATATTCA GGAAATTCAT GTGTGGAATG AAGGAGGGAA AATATCAAAA GCCGGCAGTG TTAATTTTTA CCAGCTGTAT CTGGAAAGTA GATTCAGATC CGTTAATTTC CGGATTGGAA GGCAAGGAGT TTTACTTGAT AACGGAAGGA TTTTTTCTGA TGCTCCCTGG GCACAACAAG GCAGGTCGCA TGAAGGGATA CGGGTAATGA AAGATTCAAA ACGTATTTCA ACAGCAATTT TTTTTTTATT TACAAGGAAG TATACTGATT ACTTTGAATC CATGTATTCT CCTGTCGGAT CACACCGGTA CAAATATTTA TTCATGTATT ATCTGAATTA TAAATCCGGC AGACATTTTT CTTTTAATAC CATTCATTCA GTTGATGTAT TTGAAGATGT AAAATCCACG CATACCTATT CACGCGCCAA CATTGGCGGA AGAATTGAAC TGACATATAA TAAATGGTAT TACACGCTGA ATGGCTACCT GCAATTCGGA CAGTATCCGT TCGGAAAAAA ACTGTTTGCT TATTATATAC AACCTGAAAT TAAACTTACA CTGAAAAAAG CGATCCTGCG TTTTGGGATT GAAGTGCTGA GCGGCACAAG TGATTCACAG CAATCGGCGG GTCATTCCGG AAATTTTGAT GTACTATATG GTGTAACCTG GAAGTTCAAT GGGAATTTGA ATATGTTTAC GCGTTTCCCT GCGGATGCAG GAGGAAAGGG CTTAGTAAAT CCGTATTTTT TTGTTACCGT TCCTGTTAAT AAAAAATTAT CTATCCGTTC AGATGTGCAT GTTTTCTTTA CACAATATCC ATTGCTGGAT GAATCGCGAC AAGCAGTAAA CCGATACCTT GGATTTGAAA ATGATCTTTC ATTAAAATAT TTTCCCGTAA AAAATGTAGA AATTAATTAC GGTTTTTCAC TGTTTACATA TGCTGCCGCG ATGAACTATT TACCTAAAAC ACAAGATGTA ACCAAGCCTG CCGTATGGAG CTATCTGATG GTTGCGTATA CATTTAATGT TGTGGATTCA AAGATGTATA AAAAGTAG
|
Protein sequence | MIAKTYIRIS FLFLSFCLCI HALYAHPADS LVRHFLLQAE IRPRLEYRYN YTLPPADTIS PDTYITQRNR VSMLYARKKW ILKADIQEIH VWNEGGKISK AGSVNFYQLY LESRFRSVNF RIGRQGVLLD NGRIFSDAPW AQQGRSHEGI RVMKDSKRIS TAIFFLFTRK YTDYFESMYS PVGSHRYKYL FMYYLNYKSG RHFSFNTIHS VDVFEDVKST HTYSRANIGG RIELTYNKWY YTLNGYLQFG QYPFGKKLFA YYIQPEIKLT LKKAILRFGI EVLSGTSDSQ QSAGHSGNFD VLYGVTWKFN GNLNMFTRFP ADAGGKGLVN PYFFVTVPVN KKLSIRSDVH VFFTQYPLLD ESRQAVNRYL GFENDLSLKY FPVKNVEINY GFSLFTYAAA MNYLPKTQDV TKPAVWSYLM VAYTFNVVDS KMYKK
|
| |